Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
APOEP02649 AC022893.2-201ENST00000564832 3296 ntBASIC4.16□□□□□ -1.74
APOEP02649 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
APOEP02649 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.16□□□□□ -1.74
APOEP02649 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.16□□□□□ -1.74
APOEP02649 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
APOEP02649 FAM35DP-201ENST00000323387 2712 ntBASIC4.15□□□□□ -1.74
APOEP02649 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.15□□□□□ -1.74
APOEP02649 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
APOEP02649 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.15□□□□□ -1.74
APOEP02649 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.15□□□□□ -1.74
APOEP02649 RPL7AP73-201ENST00000413490 353 ntBASIC4.15□□□□□ -1.75
APOEP02649 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
APOEP02649 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.15□□□□□ -1.75
APOEP02649 OR8F1P-201ENST00000425243 930 ntBASIC4.15□□□□□ -1.75
APOEP02649 AC244033.1-201ENST00000426826 870 ntBASIC4.15□□□□□ -1.75
APOEP02649 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.15□□□□□ -1.75
APOEP02649 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.15□□□□□ -1.75
APOEP02649 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.15□□□□□ -1.75
APOEP02649 RPS11P1-201ENST00000451072 473 ntBASIC4.15□□□□□ -1.75
APOEP02649 AC111000.5-201ENST00000506559 1178 ntBASIC4.15□□□□□ -1.75
APOEP02649 MTND1P6-201ENST00000523621 946 ntBASIC4.15□□□□□ -1.75
APOEP02649 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.15□□□□□ -1.75
APOEP02649 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.15□□□□□ -1.75
APOEP02649 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.15□□□□□ -1.75
APOEP02649 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.15□□□□□ -1.75
APOEP02649 AL109741.3-201ENST00000561748 592 ntBASIC4.15□□□□□ -1.75
APOEP02649 AC234775.3-201ENST00000564612 656 ntBASIC4.15□□□□□ -1.75
APOEP02649 AC022968.1-201ENST00000567372 442 ntBASIC4.15□□□□□ -1.75
APOEP02649 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.15□□□□□ -1.75
APOEP02649 AL606490.9-201ENST00000603331 271 ntBASIC4.15□□□□□ -1.75
APOEP02649 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
APOEP02649 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
APOEP02649 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.15□□□□□ -1.75
APOEP02649 MTND4P10-201ENST00000446199 1363 ntBASIC4.14□□□□□ -1.75
APOEP02649 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
APOEP02649 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
APOEP02649 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
APOEP02649 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
APOEP02649 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
APOEP02649 RNA5SP515-201ENST00000364570 118 ntBASIC4.14□□□□□ -1.75
APOEP02649 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.14□□□□□ -1.75
APOEP02649 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
APOEP02649 SNORA57.1-201ENST00000391227 145 ntBASIC4.14□□□□□ -1.75
APOEP02649 AL136131.1-201ENST00000406079 803 ntBASIC4.14□□□□□ -1.75
APOEP02649 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.14□□□□□ -1.75
APOEP02649 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.14□□□□□ -1.75
APOEP02649 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
APOEP02649 MTND2P2-201ENST00000434633 945 ntBASIC4.14□□□□□ -1.75
APOEP02649 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.14□□□□□ -1.75
APOEP02649 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.14□□□□□ -1.75
APOEP02649 AC010460.1-201ENST00000507087 466 ntBASIC4.14□□□□□ -1.75
APOEP02649 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.14□□□□□ -1.75
APOEP02649 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.14□□□□□ -1.75
APOEP02649 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.14□□□□□ -1.75
APOEP02649 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.14□□□□□ -1.75
APOEP02649 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.14□□□□□ -1.75
APOEP02649 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.14□□□□□ -1.75
APOEP02649 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.14□□□□□ -1.75
APOEP02649 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.14□□□□□ -1.75
APOEP02649 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.14□□□□□ -1.75
APOEP02649 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.14□□□□□ -1.75
APOEP02649 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.14□□□□□ -1.75
APOEP02649 AC244505.7-201ENST00000599675 272 ntBASIC4.14□□□□□ -1.75
APOEP02649 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.14□□□□□ -1.75
APOEP02649 AL592436.1-201ENST00000605135 558 ntBASIC4.14□□□□□ -1.75
APOEP02649 AC012557.1-201ENST00000607115 611 ntBASIC4.14□□□□□ -1.75
APOEP02649 AC024941.1-201ENST00000612250 334 ntBASIC4.14□□□□□ -1.75
APOEP02649 AL591424.2-201ENST00000617023 128 ntBASIC4.14□□□□□ -1.75
APOEP02649 AL356274.1-201ENST00000617064 410 ntBASIC4.14□□□□□ -1.75
APOEP02649 MIR6875-201ENST00000617506 72 ntBASIC4.14□□□□□ -1.75
APOEP02649 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
APOEP02649 AC124312.6-202ENST00000623624 418 ntBASIC4.14□□□□□ -1.75
APOEP02649 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
APOEP02649 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
APOEP02649 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
APOEP02649 HSPA8P1-201ENST00000425843 1833 ntBASIC4.14□□□□□ -1.75
APOEP02649 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
APOEP02649 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
APOEP02649 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
APOEP02649 AP002001.2-201ENST00000529025 1469 ntBASIC4.13□□□□□ -1.75
APOEP02649 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
APOEP02649 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.13□□□□□ -1.75
APOEP02649 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
APOEP02649 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
APOEP02649 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
APOEP02649 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
APOEP02649 AL356967.1-201ENST00000406305 431 ntBASIC4.13□□□□□ -1.75
APOEP02649 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.13□□□□□ -1.75
APOEP02649 AC099336.2-201ENST00000422457 254 ntBASIC4.13□□□□□ -1.75
APOEP02649 BMS1P19-201ENST00000433925 393 ntBASIC4.13□□□□□ -1.75
APOEP02649 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
APOEP02649 VN1R25P-201ENST00000443385 738 ntBASIC4.13□□□□□ -1.75
APOEP02649 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.13□□□□□ -1.75
APOEP02649 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.13□□□□□ -1.75
APOEP02649 VN1R40P-201ENST00000455196 941 ntBASIC4.13□□□□□ -1.75
APOEP02649 AC099560.2-201ENST00000457554 255 ntBASIC4.13□□□□□ -1.75
APOEP02649 AP002371.1-201ENST00000463604 433 ntBASIC4.13□□□□□ -1.75
APOEP02649 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.13□□□□□ -1.75
APOEP02649 VN1R105P-201ENST00000486595 910 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms