Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 CYP4A43P-201ENST00000568156 121 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.6□□□□□ -1.67
COL2A1P02458 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 AC112503.2-201ENST00000609005 552 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 AC026368.1-201ENST00000614934 690 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.6□□□□□ -1.67
COL2A1P02458 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.6□□□□□ -1.67
COL2A1P02458 SAMMSON-213ENST00000641336 1521 ntBASIC4.6□□□□□ -1.67
COL2A1P02458 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL2A1P02458 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL2A1P02458 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL2A1P02458 MTND5P1-201ENST00000445440 1375 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL2A1P02458 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL2A1P02458 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
COL2A1P02458 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.59□□□□□ -1.67
COL2A1P02458 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.59□□□□□ -1.67
COL2A1P02458 SYF2P2-201ENST00000417620 583 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.59□□□□□ -1.67
COL2A1P02458 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.59□□□□□ -1.67
COL2A1P02458 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.59□□□□□ -1.67
COL2A1P02458 RPS17P13-201ENST00000448974 407 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.59□□□□□ -1.67
COL2A1P02458 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.59□□□□□ -1.67
COL2A1P02458 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.59□□□□□ -1.67
COL2A1P02458 AL358832.1-201ENST00000497800 389 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.59□□□□□ -1.67
COL2A1P02458 RNU1-95P-201ENST00000516357 160 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 RNU1-128P-201ENST00000516704 160 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.59□□□□□ -1.67
COL2A1P02458 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.59□□□□□ -1.67
COL2A1P02458 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL2A1P02458 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.59□□□□□ -1.67
COL2A1P02458 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.59□□□□□ -1.67
COL2A1P02458 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.59□□□□□ -1.67
COL2A1P02458 MTND3P12-201ENST00000559068 328 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.59□□□□□ -1.67
COL2A1P02458 MTND6P33-201ENST00000571794 183 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 OR1AB1P-201ENST00000585564 761 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.59□□□□□ -1.67
COL2A1P02458 AC009303.3-201ENST00000591103 736 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL2A1P02458 AC006363.1-201ENST00000603806 463 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 AC016597.2-201ENST00000613256 341 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 AL391597.1-201ENST00000618707 694 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 AC008993.2-201ENST00000631744 806 ntBASIC4.59□□□□□ -1.67
COL2A1P02458 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL2A1P02458 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
COL2A1P02458 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
COL2A1P02458 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL2A1P02458 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL2A1P02458 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL2A1P02458 ZNF962P-201ENST00000443465 3140 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 AL356274.2-201ENST00000624379 3752 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL2A1P02458 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL2A1P02458 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL2A1P02458 RNU6-925P-201ENST00000384629 104 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 AL139247.1-201ENST00000422768 325 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.58□□□□□ -1.68
COL2A1P02458 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.58□□□□□ -1.68
COL2A1P02458 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.58□□□□□ -1.68
COL2A1P02458 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.58□□□□□ -1.68
COL2A1P02458 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.58□□□□□ -1.68
COL2A1P02458 AL133244.1-201ENST00000456007 258 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 AC068587.2-201ENST00000478386 781 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL2A1P02458 AC017037.1-201ENST00000508460 471 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 PPBPP1-201ENST00000510807 373 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 IGKV2-38-201ENST00000517443 247 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.58□□□□□ -1.68
COL2A1P02458 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.58□□□□□ -1.68
COL2A1P02458 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.58□□□□□ -1.68
COL2A1P02458 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.58□□□□□ -1.68
COL2A1P02458 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.58□□□□□ -1.68
COL2A1P02458 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.58□□□□□ -1.68
COL2A1P02458 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.58□□□□□ -1.68
COL2A1P02458 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.58□□□□□ -1.68
COL2A1P02458 BNIP3P27-201ENST00000599991 412 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.58□□□□□ -1.68
COL2A1P02458 AC006946.3-201ENST00000609791 756 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 NF1P10-201ENST00000613227 742 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 AC107905.1-201ENST00000616204 426 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.58□□□□□ -1.68
COL2A1P02458 AL139089.1-201ENST00000620372 975 ntBASIC4.58□□□□□ -1.68
COL2A1P02458 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL2A1P02458 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL2A1P02458 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.58□□□□□ -1.68
COL2A1P02458 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL2A1P02458 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL2A1P02458 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL2A1P02458 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.57□□□□□ -1.68
COL2A1P02458 TRIM60P17-201ENST00000415181 719 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 MTCO2P17-201ENST00000424336 677 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 HLA-N-201ENST00000437516 135 ntBASIC4.57□□□□□ -1.68
COL2A1P02458 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.57□□□□□ -1.68
COL2A1P02458 OFD1P3Y-201ENST00000453312 783 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms