Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL139099.1-201ENST00000497398 403 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 AC113430.1-201ENST00000506872 718 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 AC023161.2-201ENST00000551218 780 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 AP005901.4-201ENST00000577336 569 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 MIR4286-201ENST00000580651 93 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 KLKP1-201ENST00000595979 403 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 LINC00901.1-201ENST00000617252 152 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 AC244205.2-202ENST00000635781 342 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 OR6C71P-202ENST00000641886 1107 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTDNEP1O95476 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 AC007656.2-201ENST00000624902 4547 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTDNEP1O95476 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTDNEP1O95476 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTDNEP1O95476 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTDNEP1O95476 RNA5SP42-201ENST00000364278 115 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 RNA5SP479-201ENST00000364858 117 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 RNU6-628P-201ENST00000410675 107 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 CASKP1-201ENST00000412870 582 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 HMGB3P20-201ENST00000417997 600 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC007064.3-201ENST00000422608 359 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 SDCBPP2-201ENST00000424643 885 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC074367.1-201ENST00000438685 1125 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 DNAJC19P1-201ENST00000455312 319 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC026402.1-201ENST00000513642 170 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 MIR2114-201ENST00000516645 80 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 PDCD5P1-201ENST00000543528 309 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 MIR5187-201ENST00000583479 76 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC022916.3-201ENST00000592961 742 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AL161912.3-201ENST00000605404 628 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 AC015908.5-201ENST00000623289 343 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 AP003072.5-201ENST00000623872 773 ntBASIC4.28□□□□□ -1.72
CTDNEP1O95476 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTDNEP1O95476 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CTDNEP1O95476 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTDNEP1O95476 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTDNEP1O95476 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTDNEP1O95476 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 RN7SKP156-201ENST00000410308 342 ntBASIC4.27□□□□□ -1.73
CTDNEP1O95476 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 AC114814.2-201ENST00000419195 485 ntBASIC4.27□□□□□ -1.73
CTDNEP1O95476 RPS26P47-201ENST00000427219 348 ntBASIC4.27□□□□□ -1.73
CTDNEP1O95476 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 SETD6P1-201ENST00000444575 317 ntBASIC4.27□□□□□ -1.73
CTDNEP1O95476 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 OR5AP1P-201ENST00000529730 940 ntBASIC4.27□□□□□ -1.73
CTDNEP1O95476 AGGF1P6-201ENST00000569213 976 ntBASIC4.27□□□□□ -1.73
CTDNEP1O95476 MIR4697-201ENST00000582977 78 ntBASIC4.27□□□□□ -1.73
CTDNEP1O95476 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 AC096586.2-201ENST00000610260 441 ntBASIC4.27□□□□□ -1.73
CTDNEP1O95476 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 AL354950.1-201ENST00000614150 568 ntBASIC4.27□□□□□ -1.73
CTDNEP1O95476 AC105105.5-201ENST00000622635 1294 ntBASIC4.27□□□□□ -1.73
CTDNEP1O95476 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTDNEP1O95476 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CTDNEP1O95476 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTDNEP1O95476 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTDNEP1O95476 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms