Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC118942.1-201ENST00000529674 1035 ntBASIC4.23□□□□□ -1.73
SNX3O60493 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX3O60493 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX3O60493 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX3O60493 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX3O60493 PCNAP1-202ENST00000595299 752 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AP003392.5-201ENST00000607857 415 ntBASIC4.23□□□□□ -1.73
SNX3O60493 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX3O60493 AC128687.2-201ENST00000609657 566 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AC100847.1-201ENST00000611316 481 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AC123768.4-201ENST00000616244 701 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AC007546.1-201ENST00000619452 559 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AC084824.4-201ENST00000620106 731 ntBASIC4.23□□□□□ -1.73
SNX3O60493 CDRT1-208ENST00000630868 794 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AL121594.5-201ENST00000631724 573 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AC139713.2-210ENST00000641741 992 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AC092162.3-201ENST00000624511 1624 ntBASIC4.23□□□□□ -1.73
SNX3O60493 AL450326.2-201ENST00000421913 1962 ntBASIC4.23□□□□□ -1.73
SNX3O60493 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX3O60493 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
SNX3O60493 AC119744.1-201ENST00000454746 1715 ntBASIC4.23□□□□□ -1.73
SNX3O60493 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX3O60493 AL445437.1-201ENST00000623157 3087 ntBASIC4.23□□□□□ -1.73
SNX3O60493 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX3O60493 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX3O60493 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX3O60493 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX3O60493 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX3O60493 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SNX3O60493 AC015813.6-201ENST00000624409 5808 ntBASIC4.22□□□□□ -1.73
SNX3O60493 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX3O60493 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX3O60493 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SNX3O60493 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SNX3O60493 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX3O60493 USP9YP4-201ENST00000424401 1745 ntBASIC4.22□□□□□ -1.73
SNX3O60493 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SNX3O60493 SNORA71.2-201ENST00000364941 134 ntBASIC4.22□□□□□ -1.73
SNX3O60493 MIR525-201ENST00000384978 85 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AL513325.1-201ENST00000417716 1034 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX3O60493 AP001324.1-201ENST00000428553 399 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AL121776.1-201ENST00000429337 372 ntBASIC4.22□□□□□ -1.73
SNX3O60493 UBE2V1P5-201ENST00000440070 405 ntBASIC4.22□□□□□ -1.73
SNX3O60493 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.22□□□□□ -1.73
SNX3O60493 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX3O60493 EIF4A1P11-201ENST00000451239 222 ntBASIC4.22□□□□□ -1.73
SNX3O60493 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX3O60493 MRPL35P4-201ENST00000453682 566 ntBASIC4.22□□□□□ -1.73
SNX3O60493 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX3O60493 RPL7P22-201ENST00000466005 733 ntBASIC4.22□□□□□ -1.73
SNX3O60493 RPS18P6-201ENST00000476880 458 ntBASIC4.22□□□□□ -1.73
SNX3O60493 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX3O60493 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX3O60493 AC026414.1-201ENST00000504046 698 ntBASIC4.22□□□□□ -1.73
SNX3O60493 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX3O60493 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX3O60493 AC008494.2-201ENST00000514544 370 ntBASIC4.22□□□□□ -1.73
SNX3O60493 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX3O60493 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX3O60493 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX3O60493 AC138701.1-201ENST00000524329 714 ntBASIC4.22□□□□□ -1.73
SNX3O60493 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX3O60493 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX3O60493 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX3O60493 AC006064.5-201ENST00000541782 248 ntBASIC4.22□□□□□ -1.73
SNX3O60493 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX3O60493 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
SNX3O60493 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX3O60493 AL109766.1-201ENST00000555080 552 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX3O60493 VN1R87P-201ENST00000596706 487 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.22□□□□□ -1.73
SNX3O60493 AL606834.3-201ENST00000602615 496 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AC087763.1-201ENST00000603391 286 ntBASIC4.22□□□□□ -1.73
SNX3O60493 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX3O60493 AL121652.1-201ENST00000608851 448 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AP000240.1-201ENST00000609910 452 ntBASIC4.22□□□□□ -1.73
SNX3O60493 EIF3FP1-201ENST00000613970 806 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AC008115.4-201ENST00000619780 775 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AC026124.2-201ENST00000621847 656 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AC073342.3-201ENST00000624211 193 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AP003072.4-201ENST00000624580 310 ntBASIC4.22□□□□□ -1.73
SNX3O60493 AC092608.3-201ENST00000625017 386 ntBASIC4.22□□□□□ -1.73
SNX3O60493 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX3O60493 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX3O60493 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX3O60493 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.22□□□□□ -1.73
SNX3O60493 PHKBP1-201ENST00000450951 1951 ntBASIC4.22□□□□□ -1.73
SNX3O60493 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SNX3O60493 AC010928.1-201ENST00000592477 1447 ntBASIC4.21□□□□□ -1.73
SNX3O60493 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX3O60493 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SNX3O60493 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNX3O60493 AC011155.1-201ENST00000316512 456 ntBASIC4.21□□□□□ -1.74
SNX3O60493 MIR323A-201ENST00000362199 86 ntBASIC4.21□□□□□ -1.74
SNX3O60493 RNA5SP242-201ENST00000364171 118 ntBASIC4.21□□□□□ -1.74
SNX3O60493 RNU6-353P-201ENST00000364266 108 ntBASIC4.21□□□□□ -1.74
SNX3O60493 OR52E6-202ENST00000379946 954 ntBASIC4.21□□□□□ -1.74
SNX3O60493 AC097374.1-203ENST00000400783 485 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms