Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 AL161713.1-201ENST00000555538 145 ntBASIC4.04□□□□□ -1.76
LSM1O15116 AC051619.2-201ENST00000559063 397 ntBASIC4.04□□□□□ -1.76
LSM1O15116 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM1O15116 MIR5047-201ENST00000579212 100 ntBASIC4.04□□□□□ -1.76
LSM1O15116 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
LSM1O15116 MIMT1-201ENST00000597105 1050 ntBASIC4.04□□□□□ -1.76
LSM1O15116 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.04□□□□□ -1.76
LSM1O15116 AL355816.1-201ENST00000607951 118 ntBASIC4.04□□□□□ -1.76
LSM1O15116 AL021707.7-201ENST00000607991 416 ntBASIC4.04□□□□□ -1.76
LSM1O15116 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM1O15116 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM1O15116 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM1O15116 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM1O15116 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM1O15116 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM1O15116 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LSM1O15116 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.03□□□□□ -1.76
LSM1O15116 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.03□□□□□ -1.76
LSM1O15116 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LSM1O15116 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
LSM1O15116 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.03□□□□□ -1.76
LSM1O15116 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LSM1O15116 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LSM1O15116 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.03□□□□□ -1.76
LSM1O15116 U1.1-201ENST00000384101 164 ntBASIC4.03□□□□□ -1.76
LSM1O15116 MIR124-3-201ENST00000384866 87 ntBASIC4.03□□□□□ -1.76
LSM1O15116 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LSM1O15116 RPS3AP23-201ENST00000401762 784 ntBASIC4.03□□□□□ -1.76
LSM1O15116 RNA5SP36-201ENST00000410197 133 ntBASIC4.03□□□□□ -1.76
LSM1O15116 RN7SKP235-201ENST00000410662 305 ntBASIC4.03□□□□□ -1.76
LSM1O15116 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.03□□□□□ -1.76
LSM1O15116 AL139128.1-201ENST00000413921 941 ntBASIC4.03□□□□□ -1.76
LSM1O15116 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.03□□□□□ -1.76
LSM1O15116 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.03□□□□□ -1.76
LSM1O15116 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.03□□□□□ -1.76
LSM1O15116 AL162151.2-201ENST00000448875 158 ntBASIC4.03□□□□□ -1.76
LSM1O15116 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
LSM1O15116 RPL23AP62-201ENST00000463396 453 ntBASIC4.03□□□□□ -1.76
LSM1O15116 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.03□□□□□ -1.76
LSM1O15116 RN7SL691P-201ENST00000494487 301 ntBASIC4.03□□□□□ -1.76
LSM1O15116 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.03□□□□□ -1.76
LSM1O15116 AC111000.3-201ENST00000508057 576 ntBASIC4.03□□□□□ -1.76
LSM1O15116 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.03□□□□□ -1.76
LSM1O15116 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.03□□□□□ -1.76
LSM1O15116 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
LSM1O15116 TRAV8-5-201ENST00000537369 341 ntBASIC4.03□□□□□ -1.76
LSM1O15116 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.03□□□□□ -1.76
LSM1O15116 AC106785.3-201ENST00000564064 847 ntBASIC4.03□□□□□ -1.76
LSM1O15116 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.03□□□□□ -1.76
LSM1O15116 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.03□□□□□ -1.76
LSM1O15116 AP003117.1-201ENST00000602771 554 ntBASIC4.03□□□□□ -1.76
LSM1O15116 AC090948.1-201ENST00000607464 549 ntBASIC4.03□□□□□ -1.76
LSM1O15116 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.03□□□□□ -1.76
LSM1O15116 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.03□□□□□ -1.76
LSM1O15116 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.03□□□□□ -1.76
LSM1O15116 AL353743.4-201ENST00000422653 1547 ntBASIC4.03□□□□□ -1.76
LSM1O15116 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LSM1O15116 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LSM1O15116 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
LSM1O15116 AC007342.9-201ENST00000623877 1385 ntBASIC4.02□□□□□ -1.77
LSM1O15116 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.02□□□□□ -1.77
LSM1O15116 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
LSM1O15116 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 RNU1-14P-201ENST00000362759 152 ntBASIC4.02□□□□□ -1.77
LSM1O15116 RN7SKP103-201ENST00000363848 320 ntBASIC4.02□□□□□ -1.77
LSM1O15116 SNORA58B-201ENST00000364259 136 ntBASIC4.02□□□□□ -1.77
LSM1O15116 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM1O15116 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.02□□□□□ -1.77
LSM1O15116 RPS16P5-201ENST00000406501 404 ntBASIC4.02□□□□□ -1.77
LSM1O15116 NRBF2P2-201ENST00000413087 861 ntBASIC4.02□□□□□ -1.77
LSM1O15116 AL590139.1-201ENST00000416267 400 ntBASIC4.02□□□□□ -1.77
LSM1O15116 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM1O15116 RNF19BPX-201ENST00000426224 625 ntBASIC4.02□□□□□ -1.77
LSM1O15116 RPS24P8-201ENST00000431490 402 ntBASIC4.02□□□□□ -1.77
LSM1O15116 MED6P1-201ENST00000439659 713 ntBASIC4.02□□□□□ -1.77
LSM1O15116 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.02□□□□□ -1.77
LSM1O15116 MORF4L1P4-201ENST00000450245 976 ntBASIC4.02□□□□□ -1.77
LSM1O15116 MTND2P8-201ENST00000450555 1025 ntBASIC4.02□□□□□ -1.77
LSM1O15116 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM1O15116 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.02□□□□□ -1.77
LSM1O15116 RPL7P32-201ENST00000457119 744 ntBASIC4.02□□□□□ -1.77
LSM1O15116 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.02□□□□□ -1.77
LSM1O15116 RPL23AP72-201ENST00000492447 435 ntBASIC4.02□□□□□ -1.77
LSM1O15116 RN7SL810P-201ENST00000493031 276 ntBASIC4.02□□□□□ -1.77
LSM1O15116 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM1O15116 RNU6-1231P-201ENST00000517185 103 ntBASIC4.02□□□□□ -1.77
LSM1O15116 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms