Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM38O00635 RNU6-413P-201ENST00000384115 107 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 MIR513B-201ENST00000385136 84 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM38O00635 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
TRIM38O00635 MTND4P26-201ENST00000415971 1359 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 PAICSP7-201ENST00000419829 962 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 OR2AM1P-201ENST00000422137 422 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 RPL12P34-201ENST00000424532 479 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM38O00635 RPS3AP44-201ENST00000425466 790 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM38O00635 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 RPL34P6-201ENST00000432390 345 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM38O00635 RHOT1P3-201ENST00000436571 331 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AL353706.1-201ENST00000436728 494 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM38O00635 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM38O00635 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TRIM38O00635 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM38O00635 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM38O00635 RNA5SP103-201ENST00000459503 118 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 OR52A4P-201ENST00000472867 958 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 RPL7P16-201ENST00000479738 738 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM38O00635 AC010625.1-201ENST00000511296 403 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 RFPL4AP5-201ENST00000514977 504 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM38O00635 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM38O00635 AC008033.2-201ENST00000542626 177 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 BNIP3P1-201ENST00000547295 580 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AC004217.3-201ENST00000551552 878 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM38O00635 SETP1-201ENST00000556014 845 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 MTND4P33-201ENST00000556706 766 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 AC021755.1-201ENST00000559747 1447 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AC090695.1-201ENST00000561269 1222 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM38O00635 AGGF1P6-201ENST00000569213 976 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM38O00635 MIR3912-201ENST00000577566 105 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 MIR4330-201ENST00000579077 105 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 MIR4691-201ENST00000583764 85 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 AC011487.3-201ENST00000593607 453 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM38O00635 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM38O00635 AC004492.1-201ENST00000607036 742 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM38O00635 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM38O00635 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM38O00635 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.1□□□□□ -1.59
TRIM38O00635 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AC243756.2-201ENST00000618406 463 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 MIR6810-201ENST00000622701 70 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 AP001642.1-201ENST00000624727 2117 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM38O00635 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.1□□□□□ -1.59
TRIM38O00635 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM38O00635 AL450326.2-201ENST00000421913 1962 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TRIM38O00635 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM38O00635 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM38O00635 AC090971.4-201ENST00000560291 1800 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM38O00635 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TRIM38O00635 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM38O00635 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM38O00635 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM38O00635 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM38O00635 ZNF652P1-201ENST00000442420 1309 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM38O00635 snoZ40.1-201ENST00000364540 72 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
TRIM38O00635 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM38O00635 RNU6-146P-201ENST00000384602 108 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 FABP12P1-201ENST00000401911 322 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM38O00635 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM38O00635 COX6B1P1-201ENST00000415962 213 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 AC090960.1-201ENST00000421072 306 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 MTND4LP11-201ENST00000422184 280 ntBASIC5.09□□□□□ -1.59
TRIM38O00635 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM38O00635 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM38O00635 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM38O00635 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms