Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTCAO00442 MIR298-201ENST00000401212 88 ntBASIC4.37□□□□□ -1.71
RTCAO00442 RNU4-27P-201ENST00000410889 139 ntBASIC4.37□□□□□ -1.71
RTCAO00442 AL158825.1-201ENST00000414735 521 ntBASIC4.37□□□□□ -1.71
RTCAO00442 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.37□□□□□ -1.71
RTCAO00442 VN1R42P-201ENST00000424651 344 ntBASIC4.37□□□□□ -1.71
RTCAO00442 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.37□□□□□ -1.71
RTCAO00442 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.37□□□□□ -1.71
RTCAO00442 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.37□□□□□ -1.71
RTCAO00442 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.37□□□□□ -1.71
RTCAO00442 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.37□□□□□ -1.71
RTCAO00442 ISCUP1-201ENST00000454451 448 ntBASIC4.37□□□□□ -1.71
RTCAO00442 MTND2P39-201ENST00000457230 764 ntBASIC4.37□□□□□ -1.71
RTCAO00442 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.37□□□□□ -1.71
RTCAO00442 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.37□□□□□ -1.71
RTCAO00442 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.37□□□□□ -1.71
RTCAO00442 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.37□□□□□ -1.71
RTCAO00442 MTCO1P30-201ENST00000515244 580 ntBASIC4.37□□□□□ -1.71
RTCAO00442 SOD1P3-201ENST00000518682 454 ntBASIC4.37□□□□□ -1.71
RTCAO00442 MTND5P21-201ENST00000531961 522 ntBASIC4.37□□□□□ -1.71
RTCAO00442 AP004242.1-201ENST00000533701 349 ntBASIC4.37□□□□□ -1.71
RTCAO00442 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.37□□□□□ -1.71
RTCAO00442 AC007448.1-201ENST00000582714 234 ntBASIC4.37□□□□□ -1.71
RTCAO00442 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.37□□□□□ -1.71
RTCAO00442 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.37□□□□□ -1.71
RTCAO00442 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.37□□□□□ -1.71
RTCAO00442 AC144521.1-201ENST00000607148 956 ntBASIC4.37□□□□□ -1.71
RTCAO00442 AC116651.1-201ENST00000609724 556 ntBASIC4.37□□□□□ -1.71
RTCAO00442 AC092608.3-201ENST00000625017 386 ntBASIC4.37□□□□□ -1.71
RTCAO00442 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.37□□□□□ -1.71
RTCAO00442 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTCAO00442 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTCAO00442 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.37□□□□□ -1.71
RTCAO00442 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTCAO00442 AC008432.1-201ENST00000615912 1320 ntBASIC4.37□□□□□ -1.71
RTCAO00442 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.37□□□□□ -1.71
RTCAO00442 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.37□□□□□ -1.71
RTCAO00442 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RTCAO00442 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.37□□□□□ -1.71
RTCAO00442 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTCAO00442 ZNF137P-201ENST00000456718 1920 ntBASIC4.36□□□□□ -1.71
RTCAO00442 MTND5P28-201ENST00000438005 1594 ntBASIC4.36□□□□□ -1.71
RTCAO00442 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
RTCAO00442 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTCAO00442 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTCAO00442 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTCAO00442 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTCAO00442 RNA5SP27-201ENST00000363839 119 ntBASIC4.36□□□□□ -1.71
RTCAO00442 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTCAO00442 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTCAO00442 RPL23AP59-201ENST00000399415 461 ntBASIC4.36□□□□□ -1.71
RTCAO00442 Z98745.1-201ENST00000402553 494 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AL049697.2-201ENST00000403708 294 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AL359643.1-201ENST00000404109 423 ntBASIC4.36□□□□□ -1.71
RTCAO00442 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.36□□□□□ -1.71
RTCAO00442 AL139128.1-201ENST00000413921 941 ntBASIC4.36□□□□□ -1.71
RTCAO00442 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.36□□□□□ -1.71
RTCAO00442 AC234779.1-201ENST00000425910 285 ntBASIC4.36□□□□□ -1.71
RTCAO00442 USP9YP9-201ENST00000429406 715 ntBASIC4.36□□□□□ -1.71
RTCAO00442 RPL7P4-203ENST00000430239 730 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.36□□□□□ -1.71
RTCAO00442 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.36□□□□□ -1.71
RTCAO00442 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.36□□□□□ -1.71
RTCAO00442 AL121877.1-201ENST00000453704 622 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AC010326.1-201ENST00000462726 602 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AP000893.1-201ENST00000474462 794 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.36□□□□□ -1.71
RTCAO00442 ARL4AP1-201ENST00000503220 705 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AC104108.1-201ENST00000509930 412 ntBASIC4.36□□□□□ -1.71
RTCAO00442 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.36□□□□□ -1.71
RTCAO00442 AC090281.1-201ENST00000523019 276 ntBASIC4.36□□□□□ -1.71
RTCAO00442 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.36□□□□□ -1.71
RTCAO00442 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.36□□□□□ -1.71
RTCAO00442 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.36□□□□□ -1.71
RTCAO00442 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.36□□□□□ -1.71
RTCAO00442 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.36□□□□□ -1.71
RTCAO00442 AC106734.1-201ENST00000568646 663 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AC006116.7-201ENST00000590141 756 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AL049634.3-201ENST00000604968 457 ntBASIC4.36□□□□□ -1.71
RTCAO00442 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RTCAO00442 AC005086.4-201ENST00000623065 213 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AC093875.1-201ENST00000623688 504 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AC138907.10-201ENST00000623708 983 ntBASIC4.36□□□□□ -1.71
RTCAO00442 AL356121.2-201ENST00000624715 780 ntBASIC4.36□□□□□ -1.71
RTCAO00442 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.36□□□□□ -1.71
RTCAO00442 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTCAO00442 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RTCAO00442 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTCAO00442 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTCAO00442 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTCAO00442 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTCAO00442 AC010300.1-201ENST00000600671 5134 ntBASIC4.35□□□□□ -1.71
RTCAO00442 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTCAO00442 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RTCAO00442 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RTCAO00442 SNORA71.2-201ENST00000364941 134 ntBASIC4.35□□□□□ -1.71
RTCAO00442 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTCAO00442 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.35□□□□□ -1.71
RTCAO00442 MIR659-201ENST00000384963 97 ntBASIC4.35□□□□□ -1.71
RTCAO00442 ENSAP1-201ENST00000392855 326 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms