Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC104164.2-201ENST00000496953 495 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 AC105233.1-201ENST00000498840 781 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC28A1O00337 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC28A1O00337 AC008494.2-201ENST00000514544 370 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC28A1O00337 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC28A1O00337 AC139103.1-201ENST00000534696 1030 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC28A1O00337 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC28A1O00337 AC006064.5-201ENST00000541782 248 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SLC28A1O00337 AL109766.1-201ENST00000555080 552 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC28A1O00337 EIF1P6-201ENST00000600054 334 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC28A1O00337 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC28A1O00337 AL121873.1-201ENST00000616013 524 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 RMST_9.1-201ENST00000619945 193 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 MIR7702-201ENST00000621931 59 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 AC091953.3-201ENST00000623220 236 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 AP003400.6-201ENST00000624698 740 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC28A1O00337 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SLC28A1O00337 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC28A1O00337 Z73965.1-201ENST00000623412 2297 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SLC28A1O00337 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
SLC28A1O00337 SAGE2P-201ENST00000420011 2126 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SLC28A1O00337 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC28A1O00337 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SLC28A1O00337 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
SLC28A1O00337 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SLC28A1O00337 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SLC28A1O00337 DHX40P1-201ENST00000588725 1412 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC28A1O00337 AC074029.4-201ENST00000624796 1859 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC28A1O00337 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SLC28A1O00337 AC008033.1-201ENST00000216407 1162 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC28A1O00337 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC28A1O00337 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SLC28A1O00337 OR6K3-202ENST00000368146 996 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 MIR93-201ENST00000385024 80 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 MIR513A2-201ENST00000385249 127 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 SNORA11F-201ENST00000408237 128 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC28A1O00337 RNA5SP104-201ENST00000410989 118 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC28A1O00337 AC004552.1-201ENST00000419089 348 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AL139095.3-201ENST00000419672 1203 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC28A1O00337 AL590762.4-201ENST00000425885 253 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 OR5AW1P-201ENST00000426334 1006 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AC023347.2-201ENST00000433994 462 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC28A1O00337 AC105402.2-201ENST00000438503 358 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AC092809.1-201ENST00000441469 474 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AC008379.1-201ENST00000463655 464 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 RPL21P126-201ENST00000470049 478 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 RPS26P3-201ENST00000470205 348 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AC090543.2-201ENST00000483963 348 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC28A1O00337 AC004057.1-201ENST00000485827 348 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC28A1O00337 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.14□□□□□ -1.75
SLC28A1O00337 AC010374.1-201ENST00000503762 1237 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 NDUFA5P12-201ENST00000503796 343 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC28A1O00337 IGBP1P5-201ENST00000507524 1000 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC28A1O00337 RNU6-334P-201ENST00000517072 102 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 OR5D15P-201ENST00000531671 942 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC28A1O00337 AC115286.1-201ENST00000604298 434 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC28A1O00337 uc_338.13-201ENST00000618243 179 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AC007546.1-201ENST00000619452 559 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 AL023881.1-201ENST00000621088 301 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC28A1O00337 AC017104.5-201ENST00000637647 639 ntBASIC4.14□□□□□ -1.75
SLC28A1O00337 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC28A1O00337 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC28A1O00337 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC28A1O00337 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC28A1O00337 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC28A1O00337 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC28A1O00337 RAD17P1-201ENST00000418130 2042 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 OR5P1P-201ENST00000299512 925 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC28A1O00337 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.13□□□□□ -1.75
SLC28A1O00337 TMSB10P2-201ENST00000416049 131 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 GAPDHP49-201ENST00000421421 961 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 MTCO2P1-201ENST00000424648 477 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC28A1O00337 ELOCP18-201ENST00000434209 337 ntBASIC4.13□□□□□ -1.75
SLC28A1O00337 RPL23AP89-201ENST00000439324 255 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms