Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
PDLIM1O00151 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PDLIM1O00151 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM1O00151 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM1O00151 CCT8P1-201ENST00000413611 1657 ntBASIC4.15□□□□□ -1.75
PDLIM1O00151 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM1O00151 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.15□□□□□ -1.75
PDLIM1O00151 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PDLIM1O00151 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM1O00151 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.15□□□□□ -1.75
PDLIM1O00151 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
PDLIM1O00151 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.15□□□□□ -1.75
PDLIM1O00151 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PDLIM1O00151 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.14□□□□□ -1.75
PDLIM1O00151 AC096656.1-201ENST00000623826 1364 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM1O00151 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM1O00151 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM1O00151 AL118496.1-201ENST00000440201 1812 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM1O00151 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.14□□□□□ -1.75
PDLIM1O00151 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM1O00151 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM1O00151 AC125257.1-201ENST00000560400 2930 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PDLIM1O00151 AL590240.1-201ENST00000334118 313 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM1O00151 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM1O00151 RNU6-185P-201ENST00000384421 107 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 MIR142-201ENST00000384835 87 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PDLIM1O00151 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM1O00151 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PDLIM1O00151 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.14□□□□□ -1.75
PDLIM1O00151 RNU4-74P-201ENST00000411280 161 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 AC010385.1-201ENST00000412374 256 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 TATDN1P1-201ENST00000414123 891 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 AC140479.3-201ENST00000418944 1126 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.14□□□□□ -1.75
PDLIM1O00151 AL121882.1-201ENST00000422893 417 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM1O00151 MORF4L1P7-201ENST00000426038 703 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.14□□□□□ -1.75
PDLIM1O00151 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.14□□□□□ -1.75
PDLIM1O00151 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.14□□□□□ -1.75
PDLIM1O00151 ELOCP3-201ENST00000439303 348 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.14□□□□□ -1.75
PDLIM1O00151 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.14□□□□□ -1.75
PDLIM1O00151 RPL23AP12-201ENST00000467573 473 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 AC025459.1-201ENST00000504072 156 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 RNA5SP309-201ENST00000516670 106 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.14□□□□□ -1.75
PDLIM1O00151 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.14□□□□□ -1.75
PDLIM1O00151 PHBP17-201ENST00000528576 541 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.14□□□□□ -1.75
PDLIM1O00151 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.14□□□□□ -1.75
PDLIM1O00151 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM1O00151 MIR3186-201ENST00000577404 85 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM1O00151 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM1O00151 BPIFA4P-203ENST00000603168 689 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 AC005034.4-201ENST00000603612 899 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.14□□□□□ -1.75
PDLIM1O00151 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM1O00151 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.14□□□□□ -1.75
PDLIM1O00151 AC008785.1-201ENST00000624475 456 ntBASIC4.14□□□□□ -1.75
PDLIM1O00151 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM1O00151 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.14□□□□□ -1.75
PDLIM1O00151 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM1O00151 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM1O00151 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM1O00151 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM1O00151 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM1O00151 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.13□□□□□ -1.75
PDLIM1O00151 SNORA70F-201ENST00000384142 135 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 MIR192-201ENST00000384915 110 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PDLIM1O00151 HMGB1P10-201ENST00000395823 563 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 AL049697.2-201ENST00000403708 294 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 RNU2-17P-201ENST00000410290 190 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 RN7SKP267-201ENST00000410381 285 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 MIR1911-201ENST00000410783 80 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 RPL37P18-201ENST00000411602 243 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 XKRYP4-201ENST00000414395 483 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM1O00151 MTCO1P52-201ENST00000433928 531 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM1O00151 AC074367.1-201ENST00000438685 1125 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 AL138878.2-201ENST00000440581 1241 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM1O00151 XKRYP5-201ENST00000449659 483 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 ABCF2P2-201ENST00000450549 296 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.13□□□□□ -1.75
PDLIM1O00151 CYCSP53-201ENST00000455540 265 ntBASIC4.13□□□□□ -1.75
PDLIM1O00151 AC005229.2-201ENST00000456995 399 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms