Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.98□□□□□ -1.77
TMX2-CTNND1H3BSU7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC093311.1-201ENST00000506586 2021 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 TPT1P2-201ENST00000413105 503 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC006946.1-201ENST00000429106 328 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 RPS29P7-201ENST00000439662 171 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 HSPE1P22-201ENST00000456856 327 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 RPL7L1P8-201ENST00000469911 741 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC098583.1-201ENST00000480875 255 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC104164.2-201ENST00000496953 495 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 BNIP3P41-201ENST00000503774 571 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 SNORA48.9-201ENST00000516419 162 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 DUX4L52-201ENST00000549363 777 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 RN7SL703P-201ENST00000578485 302 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 MIR3944-201ENST00000581277 108 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC068020.1-201ENST00000594215 661 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC112230.1-201ENST00000604342 547 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC078899.5-201ENST00000612475 178 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC016911.1-201ENST00000613297 452 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 MIR6500-201ENST00000622700 86 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC019278.1-201ENST00000623516 479 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC008013.2-202ENST00000637965 364 ntBASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TMX2-CTNND1H3BSU7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.96□□□□□ -1.77
TMX2-CTNND1H3BSU7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
TMX2-CTNND1H3BSU7 AC116667.1-201ENST00000604855 2072 ntBASIC3.96□□□□□ -1.77
TMX2-CTNND1H3BSU7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 MIR449B-201ENST00000384995 97 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 RNA5SP171-201ENST00000391071 115 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL590704.1-201ENST00000402856 794 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 NCSTNP1-201ENST00000406229 144 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL691449.1-201ENST00000426570 421 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 MTCO1P51-201ENST00000427672 1060 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC018644.1-201ENST00000429934 551 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL358232.1-201ENST00000448030 501 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL133547.1-201ENST00000448546 220 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 RN7SL585P-201ENST00000470538 280 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 OR52A4P-203ENST00000498233 1014 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 PHBP17-201ENST00000528576 541 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC025423.2-201ENST00000537570 439 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 MTND2P17-201ENST00000550281 688 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 HMGB3P26-201ENST00000560051 582 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC120057.2-201ENST00000571520 271 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC053481.3-201ENST00000577881 843 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC107982.3-201ENST00000584957 985 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC096586.2-201ENST00000610260 441 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC064801.1-201ENST00000612025 407 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC095038.2-201ENST00000621464 1070 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AC138907.10-201ENST00000623708 983 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 MIR6715B-201ENST00000637172 77 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TMX2-CTNND1H3BSU7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TMX2-CTNND1H3BSU7 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.95□□□□□ -1.78
TMX2-CTNND1H3BSU7 HSPA8P1-201ENST00000425843 1833 ntBASIC3.95□□□□□ -1.78
TMX2-CTNND1H3BSU7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TMX2-CTNND1H3BSU7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms