Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TPTE2P6-202ENST00000445572 1007 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 ATG12P2-201ENST00000456830 416 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 RPL7AP6-201ENST00000477943 801 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 RN7SL629P-201ENST00000489622 285 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 RPL36AP41-201ENST00000493820 306 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 RPL5P23-201ENST00000496040 868 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 RNU6-1129P-201ENST00000515964 104 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 RNU2-30P-201ENST00000516209 141 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 snoU109.6-201ENST00000516831 118 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 CYCSP28-201ENST00000534284 321 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 GSTP1P1-201ENST00000548078 319 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 HMGN2P6-201ENST00000551091 273 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AC009117.1-201ENST00000563948 554 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 BNIP3P26-201ENST00000600827 554 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AC073091.2-201ENST00000603205 907 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AC023158.2-201ENST00000614876 543 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AC016769.4-201ENST00000616893 535 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AC026422.1-201ENST00000623961 452 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 CDRT1-208ENST00000630868 794 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 BRAFP1-201ENST00000445336 2703 ntBASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV7S3A2A0A539 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC093775.1-201ENST00000624154 1868 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 IL6STP1-201ENST00000346911 1020 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 MTND2P18-201ENST00000419962 1030 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 MFSD13B-201ENST00000420133 1290 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC004448.2-201ENST00000422360 586 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 NRBF2P3-201ENST00000432731 865 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 MTND1P32-201ENST00000433043 938 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 USP9YP22-201ENST00000438971 294 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 ART2BP-201ENST00000453501 499 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 ANKRD26P4-201ENST00000455755 950 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC005008.1-201ENST00000456151 612 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC063943.1-201ENST00000465434 453 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC015724.1-201ENST00000478577 156 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 RPS3AP22-201ENST00000488297 769 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC010486.3-201ENST00000511602 785 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 NDUFB4P12-201ENST00000513465 390 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 Y_RNA.688-201ENST00000516565 95 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 MTND2P26-201ENST00000528255 1029 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC010198.2-201ENST00000550612 259 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC068714.1-201ENST00000559623 800 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC016839.1-201ENST00000578162 867 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 SLC25A36P1-201ENST00000590111 465 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC004223.2-201ENST00000590309 544 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 LSM1P2-201ENST00000604911 322 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AL391358.1-201ENST00000605342 190 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC243654.2-201ENST00000612843 443 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC022509.4-201ENST00000621404 572 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC131159.1-201ENST00000621854 213 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 AC119744.1-201ENST00000454746 1715 ntBASIC4.69□□□□□ -1.66
TCRBV7S3A2A0A539 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms