Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MTND1P30-201ENST00000441241 901 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 EIF4A1P11-201ENST00000451239 222 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 TPTE2P5-203ENST00000458118 728 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC010683.1-201ENST00000473673 378 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 RN7SL826P-201ENST00000479724 288 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC004453.1-201ENST00000487895 408 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC072052.1-201ENST00000496556 306 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC008953.1-201ENST00000497334 318 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC108078.3-201ENST00000502633 489 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 PMS2P3-207ENST00000529061 717 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC018552.3-201ENST00000567416 561 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC000068.2-201ENST00000608816 460 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC073114.1-201ENST00000612027 490 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 MIR6864-201ENST00000617935 70 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC068870.2-201ENST00000620635 389 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AC007529.1-201ENST00000418574 2178 ntBASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA3Q9Y5H0 CYP1D1P-201ENST00000416662 1433 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 SMG1P6-201ENST00000532337 2930 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC239868.2-201ENST00000564237 4527 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 RNU4-24P-201ENST00000364565 139 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 RNU6-146P-201ENST00000384602 108 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 RN7SKP213-201ENST00000410746 298 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AL133325.1-201ENST00000421090 382 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC096632.1-201ENST00000427395 310 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 CYCSP6-201ENST00000434498 302 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 OR52B5P-201ENST00000435337 951 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 MTCO2P18-201ENST00000457151 658 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 RN7SL222P-201ENST00000476452 299 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 RPS4XP1-201ENST00000482189 787 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 RPL15P21-201ENST00000495592 567 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 FTH1P24-201ENST00000503502 462 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 NDUFA5P12-201ENST00000503796 343 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 MTCO3P7-201ENST00000510008 774 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 Y_RNA.655-201ENST00000515919 96 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 RNU6-941P-201ENST00000516346 108 ntBASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHGA3Q9Y5H0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms