Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC011611.5-201ENST00000552477 578 ntBASIC4.58□□□□□ -1.68
YIPF1Q9Y548 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 NPM1P47-201ENST00000560843 856 ntBASIC4.58□□□□□ -1.68
YIPF1Q9Y548 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 MIR3936-201ENST00000584304 110 ntBASIC4.58□□□□□ -1.68
YIPF1Q9Y548 HMGB2P1-201ENST00000591146 634 ntBASIC4.58□□□□□ -1.68
YIPF1Q9Y548 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 AL137072.1-201ENST00000603444 466 ntBASIC4.58□□□□□ -1.68
YIPF1Q9Y548 AP002360.3-201ENST00000607673 710 ntBASIC4.58□□□□□ -1.68
YIPF1Q9Y548 MIR8059-201ENST00000620427 81 ntBASIC4.58□□□□□ -1.68
YIPF1Q9Y548 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 AL445363.3-201ENST00000623080 671 ntBASIC4.58□□□□□ -1.68
YIPF1Q9Y548 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 MIR492-201ENST00000638676 116 ntBASIC4.58□□□□□ -1.68
YIPF1Q9Y548 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 AC104260.2-201ENST00000623551 3497 ntBASIC4.58□□□□□ -1.68
YIPF1Q9Y548 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
YIPF1Q9Y548 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 RPL36AP10-201ENST00000421785 322 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 RPL23AP25-201ENST00000430973 463 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 BTF3P10-201ENST00000433415 495 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 MTND2P2-201ENST00000434633 945 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AC092447.2-201ENST00000435487 669 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 Z80107.1-201ENST00000436830 412 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 RRM2P4-201ENST00000441721 562 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AL589765.3-201ENST00000446084 462 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 GTF2IP12-201ENST00000456547 356 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 DUXAP8-207ENST00000456786 622 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 RPS7P7-201ENST00000463499 571 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 RPL35AP15-201ENST00000468042 339 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 RPL23AP37-201ENST00000479658 549 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 RPS4XP18-201ENST00000495480 763 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 RNA5SP519-201ENST00000516480 119 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 MIR4509-3-201ENST00000578671 94 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AC022884.3-201ENST00000579571 248 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 MIR4509-2-201ENST00000583920 94 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AL160290.3-201ENST00000604869 165 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 DUXAP10-204ENST00000612052 616 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AC024941.1-201ENST00000612250 334 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AL021997.2-201ENST00000615674 271 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 MIR4509-1-201ENST00000618224 94 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 AC090506.2-201ENST00000624521 419 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 ZNF849P-201ENST00000594711 1566 ntBASIC4.57□□□□□ -1.68
YIPF1Q9Y548 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
YIPF1Q9Y548 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 RNA5SP175-201ENST00000364275 119 ntBASIC4.56□□□□□ -1.68
YIPF1Q9Y548 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 SNORA74C-2-201ENST00000411179 201 ntBASIC4.56□□□□□ -1.68
YIPF1Q9Y548 MTCO2P17-201ENST00000424336 677 ntBASIC4.56□□□□□ -1.68
YIPF1Q9Y548 AC012519.1-201ENST00000424588 610 ntBASIC4.56□□□□□ -1.68
YIPF1Q9Y548 COX6CP15-201ENST00000426313 211 ntBASIC4.56□□□□□ -1.68
YIPF1Q9Y548 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.56□□□□□ -1.68
YIPF1Q9Y548 HSFY3P-201ENST00000444242 1191 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms