Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.73□□□□□ -1.81
RHBDD3Q9Y3P4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 MAPK10-372ENST00000641954 3413 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 OR4K17-201ENST00000315543 1032 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 RNA5SP175-201ENST00000364275 119 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 SNORA70E-201ENST00000384492 135 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 RNA5SP306-201ENST00000411087 107 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC009963.2-201ENST00000453431 138 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC096992.1-201ENST00000459808 709 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 RPS20P21-201ENST00000466859 343 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 RPS26P15-201ENST00000488067 348 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 RN7SKP234-201ENST00000517173 224 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 IGLVIV-53-201ENST00000520107 367 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC137768.1-201ENST00000549998 553 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC069304.3-201ENST00000603938 1084 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AL049634.3-201ENST00000604968 457 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC012603.1-201ENST00000606424 528 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC116651.1-201ENST00000609724 556 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 AC138649.5-201ENST00000637456 137 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 MFSD8-216ENST00000641147 4009 ntBASIC3.72□□□□□ -1.81
RHBDD3Q9Y3P4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.71□□□□□ -1.81
RHBDD3Q9Y3P4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AL137100.1-201ENST00000556703 1620 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 RNA5SP388-201ENST00000362584 119 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 LINC01881-201ENST00000416103 412 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AC004552.1-201ENST00000419089 348 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AL445528.1-201ENST00000426330 420 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AC011998.1-201ENST00000433403 117 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AL132765.1-201ENST00000434165 553 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 RPS26P3-201ENST00000470205 348 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 RN7SL585P-201ENST00000470538 280 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AC090543.2-201ENST00000483963 348 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AC004057.1-201ENST00000485827 348 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AC104687.1-201ENST00000485829 412 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AC091917.2-201ENST00000505002 744 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 UBTFL9-201ENST00000534504 1148 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AL109766.1-201ENST00000555080 552 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AL121594.4-201ENST00000556211 1196 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AC007599.1-201ENST00000568688 1174 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 AC006270.2-201ENST00000578523 652 ntBASIC3.71□□□□□ -1.82
RHBDD3Q9Y3P4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms