Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COPS3Q9UNS2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.8□□□□□ -1.8
COPS3Q9UNS2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.8□□□□□ -1.8
COPS3Q9UNS2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.8□□□□□ -1.8
COPS3Q9UNS2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COPS3Q9UNS2 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 MFSD8-242ENST00000641690 4199 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 RNU4-31P-201ENST00000384211 141 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 RNU6-1005P-201ENST00000384519 107 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 MIR142-201ENST00000384835 87 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AL035419.1-201ENST00000397037 564 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 TMSB10P2-201ENST00000416049 131 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC007394.1-201ENST00000421941 531 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 RBMY1KP-201ENST00000423480 476 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 RPS26P40-201ENST00000435209 294 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AL513321.1-201ENST00000441175 761 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC069540.1-201ENST00000446320 988 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 RN7SL354P-201ENST00000469282 294 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC105233.1-201ENST00000498840 781 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC017037.1-201ENST00000508460 471 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 SNORD116-26-201ENST00000516006 96 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 IGKV1-32-201ENST00000519290 311 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 OR5AN2P-201ENST00000534535 896 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 OR4U1P-201ENST00000554958 912 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC106785.3-201ENST00000564064 847 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 MTND4LP24-201ENST00000572277 291 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC069061.3-201ENST00000582254 823 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC068790.7-201ENST00000602347 528 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC008782.1-201ENST00000603386 430 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC015849.2-201ENST00000605738 409 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC017076.1-201ENST00000607613 578 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC008785.1-201ENST00000624475 456 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 AC092162.3-201ENST00000624511 1624 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 ZNF90P1-201ENST00000480493 1951 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COPS3Q9UNS2 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.79□□□□□ -1.8
COPS3Q9UNS2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 RNA5SP175-201ENST00000364275 119 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 AP000357.1-201ENST00000409926 1165 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 RN7SKP56-201ENST00000410513 331 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 RPS24P8-201ENST00000431490 402 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 GSTA7P-201ENST00000438425 448 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 RPL23AP89-201ENST00000439324 255 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 AC006517.1-201ENST00000480485 328 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 KCTD9P2-201ENST00000512203 1013 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 IGKV2-36-201ENST00000519999 223 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COPS3Q9UNS2 AC244505.7-201ENST00000599675 272 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 AC115286.1-201ENST00000604298 434 ntBASIC3.78□□□□□ -1.8
COPS3Q9UNS2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms