Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIMBP3Q9UFD9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 UBTFL3-201ENST00000418934 1024 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 VTI1BP4-201ENST00000427516 527 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 SNORA71B-202ENST00000439232 272 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 GTF3AP5-201ENST00000442645 697 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 RPS17P13-201ENST00000448974 407 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 FDX1P2-201ENST00000450769 375 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 UBTFL6-201ENST00000477929 1024 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 BX323014.1-201ENST00000412876 237 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 OR1AA1P-201ENST00000419597 916 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 AC093698.1-201ENST00000423843 571 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 AL513175.1-201ENST00000431492 780 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 UBE2NP1-201ENST00000545592 458 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 AC064801.1-201ENST00000612025 407 ntBASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.92□□□□□ -1.46
RIMBP3Q9UFD9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 MAPK10-303ENST00000641324 3959 ntBASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 LIPT1P1-201ENST00000415870 1186 ntBASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 OSTCP5-201ENST00000425293 453 ntBASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 AL035404.1-201ENST00000497982 568 ntBASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 AC107993.1-201ENST00000591343 684 ntBASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.91□□□□□ -1.46
RIMBP3Q9UFD9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 BX842559.1-201ENST00000419615 532 ntBASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 AC003685.2-201ENST00000422795 395 ntBASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 OR2AH1P-201ENST00000425717 928 ntBASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 RNA5SP356-201ENST00000515972 94 ntBASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 AC006539.2-201ENST00000601729 572 ntBASIC5.9□□□□□ -1.46
RIMBP3Q9UFD9 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIMBP3Q9UFD9 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
RIMBP3Q9UFD9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
RIMBP3Q9UFD9 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RIMBP3Q9UFD9 AC125336.1-201ENST00000508893 2827 ntBASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 RPL31P50-201ENST00000471002 296 ntBASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 MIR4524B-201ENST00000581569 115 ntBASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 AC006116.10-201ENST00000591836 581 ntBASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 AL390838.2-201ENST00000602394 274 ntBASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 MIR7702-201ENST00000621931 59 ntBASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIMBP3Q9UFD9 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms