Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
TREX1Q9NSU2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC095050.2-201ENST00000510748 1458 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AL034403.1-201ENST00000399414 885 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 RN7SKP177-201ENST00000410567 355 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC234779.1-201ENST00000425910 285 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC092045.1-201ENST00000495716 1231 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 RN7SKP122-201ENST00000515923 296 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AL360157.1-201ENST00000565962 87 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 VN1R84P-201ENST00000593697 235 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC025946.2-201ENST00000603398 234 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 MIR6867-201ENST00000610636 67 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AL591424.2-201ENST00000617023 128 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC103858.2-201ENST00000621471 543 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 LINC02471-203ENST00000641941 4752 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.95□□□□□ -1.78
TREX1Q9NSU2 AC010300.1-201ENST00000600671 5134 ntBASIC3.95□□□□□ -1.78
TREX1Q9NSU2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AC104306.1-201ENST00000449702 371 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 SNRPGP5-201ENST00000456003 220 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 RPL7P19-201ENST00000469948 618 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AC026979.1-201ENST00000492525 396 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AC020593.1-201ENST00000507399 299 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 MTCO3P42-201ENST00000509488 518 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 MTCO3P39-201ENST00000514812 518 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 SNORA31.9-201ENST00000516429 84 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 NDUFA5P2-201ENST00000519723 344 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AC084373.1-201ENST00000603311 235 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AC083899.3-201ENST00000603413 594 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AC091167.4-201ENST00000605079 184 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 AC008725.1-201ENST00000605123 2263 ntBASIC3.94□□□□□ -1.78
TREX1Q9NSU2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TREX1Q9NSU2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 IQCB2P-201ENST00000401788 1633 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 XIAPP3-201ENST00000312918 795 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 RNA5SP443-201ENST00000363083 132 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
TREX1Q9NSU2 AL022722.2-201ENST00000402519 180 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 USP12PY-201ENST00000427677 1064 ntBASIC3.93□□□□□ -1.78
TREX1Q9NSU2 NPM1P34-201ENST00000428821 893 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms