Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP4AQ9BY43 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 RNA5SP443-201ENST00000363083 132 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHMP4AQ9BY43 RN7SKP106-201ENST00000410832 272 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 RPS3AP9-201ENST00000417027 792 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 AC008280.1-201ENST00000418851 412 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 MTCYBP24-201ENST00000420387 1106 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 AC241520.1-201ENST00000422654 1099 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 CKS1BP5-201ENST00000434172 273 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 MOB1AP2-201ENST00000446060 614 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHMP4AQ9BY43 HMGB3P16-201ENST00000508037 287 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 RN7SKP92-201ENST00000517266 244 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 HIGD1AP6-201ENST00000521833 279 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 MIR4330-201ENST00000579077 105 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 VN1R79P-201ENST00000593540 513 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 AL133338.2-201ENST00000604292 736 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 AC112230.1-201ENST00000604342 547 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 VN1R9P-201ENST00000614184 867 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 AC004232.3-201ENST00000622977 525 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 ELL2P4-201ENST00000446870 1376 ntBASIC6□□□□□ -1.45
CHMP4AQ9BY43 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP4AQ9BY43 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6□□□□□ -1.45
CHMP4AQ9BY43 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CHMP4AQ9BY43 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6□□□□□ -1.45
CHMP4AQ9BY43 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AC116096.1-201ENST00000566804 2314 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 OR56B2P-202ENST00000641377 2453 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 RNU6-398P-201ENST00000384143 109 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AL355379.1-201ENST00000405542 640 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 OR51B3P-201ENST00000412287 913 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AC012512.1-201ENST00000446594 718 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 RPS27AP15-201ENST00000447672 466 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AC112206.1-201ENST00000468416 477 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AC104763.1-201ENST00000475274 360 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 VWA8P1-201ENST00000510889 176 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 SNORA26.10-201ENST00000516427 141 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AP000827.1-201ENST00000527814 258 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AP004242.1-201ENST00000533701 349 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AL136295.6-201ENST00000610486 658 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 AC093875.1-201ENST00000623688 504 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 KARSP3-201ENST00000571212 1504 ntBASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CHMP4AQ9BY43 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 AC015813.6-201ENST00000624409 5808 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 RNU6-1243P-201ENST00000364028 107 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 SFR1P1-201ENST00000403720 688 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 ARL4AP5-201ENST00000404372 599 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 AL603766.1-201ENST00000407763 664 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 RPL34P6-201ENST00000432390 345 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 RPL7P33-201ENST00000444159 742 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 HSFY3P-201ENST00000444242 1191 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 SCARNA10-201ENST00000459255 330 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 RN7SL738P-201ENST00000470264 297 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 AC022795.1-201ENST00000473808 480 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 AC087879.1-201ENST00000474343 374 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 AC135001.1-201ENST00000544546 283 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 AC069061.3-201ENST00000582254 823 ntBASIC5.98□□□□□ -1.45
CHMP4AQ9BY43 AC018754.1-201ENST00000607486 925 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms