Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 MIMT1-201ENST00000597105 1050 ntBASIC5.75□□□□□ -1.49
SCAPERQ9BY12 MIR7154-201ENST00000620673 73 ntBASIC5.75□□□□□ -1.49
SCAPERQ9BY12 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 DDX18P6-201ENST00000450119 1997 ntBASIC5.75□□□□□ -1.49
SCAPERQ9BY12 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCAPERQ9BY12 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 SNORD105B-201ENST00000458770 79 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 AC017015.1-201ENST00000477387 286 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 SNORA70.17-201ENST00000516449 133 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 IGLV3-26-201ENST00000520756 302 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 RNU4-44P-201ENST00000363050 141 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 HDGFP1-201ENST00000405943 252 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 OR2X1P-201ENST00000421144 687 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 SETD6P1-201ENST00000444575 317 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 AC026784.1-201ENST00000507986 352 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 AL355365.1-201ENST00000616480 294 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 AC079684.1-201ENST00000621405 437 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 CR392039.4-201ENST00000624968 501 ntBASIC5.74□□□□□ -1.49
SCAPERQ9BY12 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.74□□□□□ -1.49
SCAPERQ9BY12 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 AC007823.1-201ENST00000569932 1566 ntBASIC5.73□□□□□ -1.49
SCAPERQ9BY12 SNORD9-201ENST00000362566 104 ntBASIC5.73□□□□□ -1.49
SCAPERQ9BY12 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 RNA5SP120-201ENST00000410900 112 ntBASIC5.73□□□□□ -1.49
SCAPERQ9BY12 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 AC005300.1-201ENST00000428401 373 ntBASIC5.73□□□□□ -1.49
SCAPERQ9BY12 AL591503.2-201ENST00000442314 1005 ntBASIC5.73□□□□□ -1.49
SCAPERQ9BY12 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 MIR8057-201ENST00000620957 69 ntBASIC5.73□□□□□ -1.49
SCAPERQ9BY12 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.73□□□□□ -1.49
SCAPERQ9BY12 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 MFSD8-236ENST00000641509 4050 ntBASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AC005261.2-201ENST00000593427 4258 ntBASIC5.72□□□□□ -1.49
SCAPERQ9BY12 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 RNA5SP50-201ENST00000363731 107 ntBASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 HMGB1P37-201ENST00000439613 609 ntBASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AL591363.1-201ENST00000450091 483 ntBASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AL136126.1-201ENST00000473603 402 ntBASIC5.72□□□□□ -1.49
SCAPERQ9BY12 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 OR5M7P-201ENST00000526140 972 ntBASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AC024224.1-201ENST00000538284 609 ntBASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AL137849.1-201ENST00000604767 169 ntBASIC5.72□□□□□ -1.49
SCAPERQ9BY12 AL122125.1-201ENST00000616999 600 ntBASIC5.72□□□□□ -1.49
SCAPERQ9BY12 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCAPERQ9BY12 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SCAPERQ9BY12 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
SCAPERQ9BY12 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SCAPERQ9BY12 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.49
SCAPERQ9BY12 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCAPERQ9BY12 AL365440.1-201ENST00000436135 2167 ntBASIC5.71□□□□□ -1.5
SCAPERQ9BY12 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SCAPERQ9BY12 RPS24P12-201ENST00000402084 394 ntBASIC5.71□□□□□ -1.5
SCAPERQ9BY12 AC096644.3-201ENST00000416788 338 ntBASIC5.71□□□□□ -1.5
SCAPERQ9BY12 RPS17P13-201ENST00000448974 407 ntBASIC5.71□□□□□ -1.5
SCAPERQ9BY12 RBMY2UP-201ENST00000453474 324 ntBASIC5.71□□□□□ -1.5
SCAPERQ9BY12 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.71□□□□□ -1.5
SCAPERQ9BY12 AC006517.1-201ENST00000480485 328 ntBASIC5.71□□□□□ -1.5
SCAPERQ9BY12 RPL32P34-201ENST00000486380 400 ntBASIC5.71□□□□□ -1.5
SCAPERQ9BY12 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.71□□□□□ -1.5
SCAPERQ9BY12 AL137843.1-201ENST00000605078 385 ntBASIC5.71□□□□□ -1.5
SCAPERQ9BY12 SNORA62.6-201ENST00000606322 83 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms