Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 RPL23AP48-201ENST00000406913 488 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 TRIM60P17-201ENST00000415181 719 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 AC106901.1-201ENST00000425086 698 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 MTCO1P51-201ENST00000427672 1060 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 RPS4XP4-201ENST00000443195 763 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 AC025857.1-201ENST00000525252 377 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 DUX4L52-201ENST00000549363 777 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 AL360157.1-201ENST00000565962 87 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 RPL23AP87-202ENST00000573039 466 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 AC068790.5-201ENST00000602741 355 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 AL158062.1-201ENST00000619632 745 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 AC015722.2-201ENST00000622210 551 ntBASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPAP1Q9BWH6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 HMGB3P19-201ENST00000403971 560 ntBASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 CRYBB2P1-203ENST00000415709 538 ntBASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 MTND6P32-201ENST00000457611 483 ntBASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 PDCD5P1-201ENST00000543528 309 ntBASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 YPEL5P3-201ENST00000547227 352 ntBASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 AC091516.1-201ENST00000549191 703 ntBASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 AC025627.2-201ENST00000576220 160 ntBASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 AC005255.1-201ENST00000593748 216 ntBASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 CR392039.5-201ENST00000623201 510 ntBASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPAP1Q9BWH6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RPAP1Q9BWH6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 MIR200C-201ENST00000384980 68 ntBASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 AL512430.2-201ENST00000406786 339 ntBASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 RPS11P1-201ENST00000451072 473 ntBASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 PRSS3P4-201ENST00000453323 162 ntBASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 AC087499.8-201ENST00000578406 226 ntBASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 MIR6868-201ENST00000611215 58 ntBASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 AC090246.1-201ENST00000616499 426 ntBASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 AL356121.2-201ENST00000624715 780 ntBASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.83□□□□□ -1.64
RPAP1Q9BWH6 AC017007.4-201ENST00000503353 1352 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 SNORA63.1-201ENST00000362493 131 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 SNORA79B-201ENST00000410557 148 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AC009237.5-201ENST00000414271 501 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AL138787.1-202ENST00000437804 898 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 MTND4LP12-201ENST00000448237 295 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 FABP3P2-201ENST00000453169 399 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 NANOGP10-201ENST00000453325 895 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 RPS6P4-201ENST00000494693 758 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AC109458.1-201ENST00000508858 316 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 SULT1C2P2-201ENST00000562517 294 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AC110743.1-201ENST00000584870 478 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 617.1 ms