Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.65□□□□□ -1.35
USB1Q9BQ65 AC130650.2-201ENST00000618736 2403 ntBASIC6.65□□□□□ -1.35
USB1Q9BQ65 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
USB1Q9BQ65 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
USB1Q9BQ65 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USB1Q9BQ65 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
USB1Q9BQ65 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
USB1Q9BQ65 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
USB1Q9BQ65 AC007012.2-201ENST00000623206 1676 ntBASIC6.65□□□□□ -1.35
USB1Q9BQ65 AP000866.6-201ENST00000638898 3579 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 OR56A5-201ENST00000340110 738 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 RNU6-188P-201ENST00000364207 107 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 RNU5E-6P-201ENST00000365574 115 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 Y_RNA.376-201ENST00000365638 108 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 Y_RNA.785-201ENST00000384290 109 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AL590143.1-201ENST00000405071 138 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC006509.1-201ENST00000420788 634 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 MRPS18CP6-201ENST00000423587 223 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 RPS26P56-201ENST00000444468 240 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC016696.1-201ENST00000446949 318 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 FTH1P25-201ENST00000447665 469 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AL929410.2-201ENST00000451170 189 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC133473.1-201ENST00000455173 299 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC013429.1-201ENST00000456604 422 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 SNORD5.1-201ENST00000458800 75 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 RPSAP24-201ENST00000461543 873 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 MED28P2-201ENST00000475771 317 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 RN7SL335P-201ENST00000482790 304 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC005726.1-201ENST00000494679 427 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 RN7SL516P-201ENST00000496127 297 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AL139099.1-201ENST00000497398 403 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AL445187.1-201ENST00000502685 260 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 HMGB1P35-201ENST00000503360 598 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC093767.1-201ENST00000504523 156 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC106774.2-201ENST00000510266 406 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 RN7SKP242-201ENST00000515967 289 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 Y_RNA.673-201ENST00000516306 88 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 RNU6-1332P-201ENST00000516666 104 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 HSPE1P20-201ENST00000538133 289 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC087257.2-201ENST00000538759 928 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 DYNLL1P4-201ENST00000549314 266 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC090115.3-201ENST00000553218 849 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 COX4I1P1-201ENST00000554239 509 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 RPA2P1-201ENST00000556557 721 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC005899.2-201ENST00000584353 90 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC011494.1-201ENST00000596454 237 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AL352984.2-201ENST00000611153 546 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 U2.17-201ENST00000611454 95 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AL136313.1-201ENST00000624804 202 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 CR392039.4-201ENST00000624968 501 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 OR7E161P-202ENST00000641994 1033 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 AC027088.4-201ENST00000611559 1947 ntBASIC6.64□□□□□ -1.35
USB1Q9BQ65 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.64□□□□□ -1.35
USB1Q9BQ65 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
USB1Q9BQ65 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms