Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CDK5RAP1Q96SZ6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC016716.1-201ENST00000265882 708 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 Y_RNA.256-201ENST00000364594 104 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 SNORD65C-201ENST00000390962 71 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 U3.36-201ENST00000408418 213 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 RNU2-17P-201ENST00000410290 190 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AL121878.1-201ENST00000418638 859 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 USP12PX-201ENST00000432383 1057 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 B3GNT2P1-201ENST00000434960 952 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 TCEA1P3-201ENST00000443005 880 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 ST13P20-201ENST00000447996 1065 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC011979.1-201ENST00000472300 483 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC105918.1-201ENST00000474399 838 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC109486.1-201ENST00000486833 374 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC104971.1-201ENST00000495117 578 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 SUMO1P1-201ENST00000497904 306 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC113347.3-201ENST00000509113 148 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 RN7SKP244-201ENST00000516513 307 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC138832.1-201ENST00000522871 556 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC005730.3-201ENST00000583067 366 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC011447.4-201ENST00000587562 111 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC004948.1-201ENST00000609858 672 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC025594.3-201ENST00000613068 790 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 RPSAP73-201ENST00000614820 330 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AL121873.1-201ENST00000616013 524 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AL357080.1-201ENST00000617394 239 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC012414.7-202ENST00000622705 1090 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 AC099494.2-201ENST00000623371 978 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 ZNF680P1-201ENST00000436625 1469 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP1Q96SZ6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 AL121657.1-201ENST00000327215 531 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 snoZ40.1-201ENST00000364540 72 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 SNORA70-201ENST00000384436 135 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 MIR600-201ENST00000385007 98 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 MIR765-201ENST00000390226 114 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 MTCO3P31-201ENST00000405526 789 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 RNU2-41P-201ENST00000410991 178 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 RPL23AP27-201ENST00000415161 451 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 AC093155.1-201ENST00000440164 826 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 RPL23AP76-201ENST00000441860 458 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 BUD31P2-201ENST00000449374 300 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 RPL7P1-201ENST00000468161 747 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 RPL7P9-201ENST00000468715 747 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 RPS18P6-201ENST00000476880 458 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 AC092989.1-201ENST00000481235 277 ntBASIC5.49□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms