Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC106858.1-201ENST00000637497 429 ntBASIC5.65□□□□□ -1.5
SIN3AQ96ST3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
SIN3AQ96ST3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SIN3AQ96ST3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SIN3AQ96ST3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.65□□□□□ -1.51
SIN3AQ96ST3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SIN3AQ96ST3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SIN3AQ96ST3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 SNORD51.1-201ENST00000365405 77 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 U1.1-201ENST00000384101 164 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 RNA5SP39-201ENST00000411245 120 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 UBE2V1P6-201ENST00000430840 422 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AC010469.1-201ENST00000463864 576 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AC092451.2-201ENST00000538746 658 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AL390334.1-201ENST00000556395 450 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AC106785.1-201ENST00000565935 262 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AL450270.1-201ENST00000606160 391 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AC024933.1-201ENST00000608472 348 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 AL122125.1-201ENST00000616999 600 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.64□□□□□ -1.51
SIN3AQ96ST3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.64□□□□□ -1.51
SIN3AQ96ST3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 Y_RNA.126-201ENST00000363382 111 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 RPL32P23-201ENST00000397237 405 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AL356057.1-202ENST00000402263 756 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 UBDP1-202ENST00000457888 382 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 RNA5SP208-201ENST00000516156 78 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AC007991.1-201ENST00000522680 631 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 TOMM20P2-201ENST00000540082 421 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AC012557.1-201ENST00000607115 611 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AL592494.3-201ENST00000609485 464 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AL591424.2-201ENST00000617023 128 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AC233309.1-201ENST00000619522 751 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 UBE3AP2-201ENST00000429033 2259 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AC097504.1-201ENST00000515103 2415 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 AC110792.3-201ENST00000595906 1614 ntBASIC5.63□□□□□ -1.51
SIN3AQ96ST3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIN3AQ96ST3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIN3AQ96ST3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
SIN3AQ96ST3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.62□□□□□ -1.51
SIN3AQ96ST3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIN3AQ96ST3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIN3AQ96ST3 SNORA57.1-201ENST00000391227 145 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 MTND4P24-201ENST00000424002 397 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.62□□□□□ -1.51
SIN3AQ96ST3 SNORA71B-202ENST00000439232 272 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 AL353748.1-201ENST00000440753 474 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 SEPT7P3-201ENST00000455017 621 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 GAPDHP36-201ENST00000480688 918 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 RN7SL323P-201ENST00000494712 295 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.62□□□□□ -1.51
SIN3AQ96ST3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIN3AQ96ST3 RAC1P2-201ENST00000511164 579 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 HMGB1P47-201ENST00000511281 589 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.62□□□□□ -1.51
SIN3AQ96ST3 AC027338.1-201ENST00000514840 825 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 IGHV3-63-201ENST00000518422 341 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.62□□□□□ -1.51
SIN3AQ96ST3 AC022695.1-201ENST00000522089 237 ntBASIC5.62□□□□□ -1.51
SIN3AQ96ST3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms