Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.98□□□□□ -1.93
AP1S3Q96PC3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 SNORA60-201ENST00000362396 134 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 SNORA37-201ENST00000384504 129 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AL583835.1-201ENST00000399570 407 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AL035696.2-201ENST00000407941 709 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 RNA5SP36-201ENST00000410197 133 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC017079.2-201ENST00000416102 485 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AL356387.2-201ENST00000422272 243 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 VN1R54P-201ENST00000435210 1049 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AL627308.1-201ENST00000435693 821 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC069277.2-201ENST00000454211 432 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 CFTRP1-201ENST00000456646 183 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 RN7SL98P-201ENST00000462271 300 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 RN7SL354P-201ENST00000469282 294 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 RPL35P6-201ENST00000490024 372 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 RN7SL810P-201ENST00000493031 276 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC012170.1-201ENST00000495139 359 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 OR7H2P-201ENST00000513483 306 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 RNU7-143P-201ENST00000516781 65 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC022655.2-201ENST00000577280 318 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC012417.1-201ENST00000582307 1039 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC015849.6-201ENST00000605454 474 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AC099669.2-201ENST00000616549 437 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 EIF2AP4-201ENST00000424793 1781 ntBASIC2.97□□□□□ -1.93
AP1S3Q96PC3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
AP1S3Q96PC3 AP001148.1-201ENST00000624124 2359 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 DHX40P1-201ENST00000588725 1412 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 SNORA51.1-201ENST00000363243 140 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 MIR124-3-201ENST00000384866 87 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AL590704.1-201ENST00000402856 794 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 SNORA81-201ENST00000408493 178 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AC007390.1-201ENST00000415722 356 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 LIPT1P1-201ENST00000415870 1186 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AC119751.6-201ENST00000416712 186 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AC048351.1-201ENST00000420064 602 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 SERPINA7P1-201ENST00000443077 631 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AC016724.1-201ENST00000453215 421 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 RPS4XP22-201ENST00000480755 780 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AF213884.1-201ENST00000488102 463 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AC078817.1-201ENST00000492623 435 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 MTCO1P30-201ENST00000515244 580 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 RNA5SP519-201ENST00000516480 119 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 RN7SKP60-201ENST00000516985 239 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 HIGD1AP10-201ENST00000527837 282 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 MIR4425-201ENST00000580572 84 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AC090948.1-201ENST00000607464 549 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AC018816.2-201ENST00000621460 353 ntBASIC2.96□□□□□ -1.94
AP1S3Q96PC3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
AP1S3Q96PC3 AF127577.6-201ENST00000623352 2191 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms