Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AL391994.1-201ENST00000254724 282 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 Y_RNA.505-201ENST00000384489 102 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 U3.35-201ENST00000408405 208 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 RNU2-22P-201ENST00000411266 212 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 RPL7P44-201ENST00000424827 742 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AL591503.2-201ENST00000442314 1005 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 RFC5P1-201ENST00000454419 874 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 MTCO2P18-201ENST00000457151 658 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC112206.1-201ENST00000468416 477 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC108751.2-201ENST00000469993 231 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 COPS8P2-201ENST00000473228 627 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 RPL30P6-201ENST00000475925 342 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 RPS18P6-201ENST00000476880 458 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC080014.1-201ENST00000496877 1201 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AL035404.1-201ENST00000497982 568 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC098799.3-201ENST00000506095 438 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 MRPS33P2-201ENST00000507850 322 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC106872.4-201ENST00000510050 523 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC004825.1-201ENST00000555068 586 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AL049839.1-201ENST00000556151 657 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 BPTFP1-201ENST00000579209 492 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC087783.2-201ENST00000605070 562 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC012414.7-202ENST00000622705 1090 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC098679.5-201ENST00000624394 571 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 FP325313.1-201ENST00000638228 703 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AC008079.2-201ENST00000623543 20396 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 RNF6P1-201ENST00000444889 1784 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 AL355852.1-201ENST00000454081 1771 ntBASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4AQ8WYN0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 ZNF652P1-201ENST00000442420 1309 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC093849.1-201ENST00000563631 2209 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 PABPC1P6-201ENST00000445594 1829 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 RNU6-931P-201ENST00000363850 107 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 RNA5SP428-201ENST00000365129 132 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 RNU6-171P-201ENST00000384354 107 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 MIR1286-201ENST00000408112 78 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 NPM1P22-201ENST00000427761 952 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC010153.1-201ENST00000432862 727 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC129850.1-201ENST00000436203 508 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 MTCO2P16-201ENST00000436962 677 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AL137845.2-201ENST00000444292 988 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 TDGF1P1-201ENST00000445734 527 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 MTCO3P16-201ENST00000454456 754 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC011411.1-201ENST00000509592 876 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 ATP5LP3-201ENST00000514223 304 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 HNRNPKP5-201ENST00000515300 253 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC087808.1-201ENST00000520501 361 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 OR5AZ1P-201ENST00000527448 943 ntBASIC5.03□□□□□ -1.6
ATG4AQ8WYN0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms