Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNA5SP120-201ENST00000410900 112 ntBASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 DYNLL1P7-201ENST00000429273 258 ntBASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 RPL7L1P1-201ENST00000448259 785 ntBASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 AC074276.2-201ENST00000619891 348 ntBASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 AC138907.10-201ENST00000623708 983 ntBASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 MIR708-201ENST00000390708 88 ntBASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 AC127537.2-201ENST00000439258 465 ntBASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 OR52Y1P-201ENST00000452418 828 ntBASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 RPS3AP14-201ENST00000483907 780 ntBASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 USP8P1-201ENST00000494673 3183 ntBASIC2.59□□□□□ -1.99
ALMS1Q8TCU4 AP002512.4-202ENST00000641599 4530 ntBASIC2.59□□□□□ -2
ALMS1Q8TCU4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC2.59□□□□□ -2
ALMS1Q8TCU4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ALMS1Q8TCU4 RNA5SP306-201ENST00000411087 107 ntBASIC2.59□□□□□ -2
ALMS1Q8TCU4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC2.59□□□□□ -2
ALMS1Q8TCU4 RPS29P4-201ENST00000414733 161 ntBASIC2.59□□□□□ -2
ALMS1Q8TCU4 RPS6P4-201ENST00000494693 758 ntBASIC2.59□□□□□ -2
ALMS1Q8TCU4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC2.59□□□□□ -2
ALMS1Q8TCU4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC2.59□□□□□ -2
ALMS1Q8TCU4 AC008694.2-201ENST00000517591 306 ntBASIC2.59□□□□□ -2
ALMS1Q8TCU4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ALMS1Q8TCU4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.59□□□□□ -2
ALMS1Q8TCU4 AL451044.1-201ENST00000604867 238 ntBASIC2.59□□□□□ -2
ALMS1Q8TCU4 AC241377.1-201ENST00000619797 406 ntBASIC2.59□□□□□ -2
ALMS1Q8TCU4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
ALMS1Q8TCU4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
ALMS1Q8TCU4 CDY11P-201ENST00000447168 1651 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ALMS1Q8TCU4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.58□□□□□ -2
ALMS1Q8TCU4 RHOT1P2-201ENST00000366423 333 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AL080315.1-201ENST00000406055 466 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 UBE2V1P1-201ENST00000430836 445 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC037198.2-201ENST00000478845 733 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC139783.2-201ENST00000504847 1145 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 HMGN1P11-201ENST00000508668 303 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC006116.10-201ENST00000591836 581 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 MTCO3P22-201ENST00000603219 784 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC007823.1-201ENST00000569932 1566 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ALMS1Q8TCU4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
ALMS1Q8TCU4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
ALMS1Q8TCU4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ALMS1Q8TCU4 RPL23AP57-201ENST00000332361 466 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC097713.2-201ENST00000430199 356 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 SNORA71B-202ENST00000439232 272 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC004069.2-201ENST00000505438 1114 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 DEFB109D-201ENST00000529497 240 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC015813.4-201ENST00000610469 179 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC119674.1-207ENST00000641355 633 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
ALMS1Q8TCU4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ALMS1Q8TCU4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
ALMS1Q8TCU4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC2.58□□□□□ -2
ALMS1Q8TCU4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
ALMS1Q8TCU4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
ALMS1Q8TCU4 RN7SKP247-201ENST00000411094 308 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 HMGB1P37-201ENST00000439613 609 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 RN7SL271P-201ENST00000487601 295 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC080014.1-201ENST00000496877 1201 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.58□□□□□ -2
ALMS1Q8TCU4 MIR3945-201ENST00000581853 98 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC009237.17-201ENST00000618111 748 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC124312.6-202ENST00000623624 418 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
ALMS1Q8TCU4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.58□□□□□ -2
ALMS1Q8TCU4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
ALMS1Q8TCU4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC2.58□□□□□ -2
ALMS1Q8TCU4 AC006971.1-201ENST00000407916 4486 ntBASIC2.58□□□□□ -2
ALMS1Q8TCU4 SNORA38.1-201ENST00000364172 131 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 ZNF602P-201ENST00000405929 924 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 RNA5SP296-201ENST00000410523 111 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 CR392039.4-201ENST00000624968 501 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 AP000542.2-201ENST00000623199 6179 ntBASIC2.57□□□□□ -2
ALMS1Q8TCU4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC2.57□□□□□ -2
ALMS1Q8TCU4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms