Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 SYT14P1-202ENST00000600441 1448 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 UBE3AP2-201ENST00000429033 2259 ntBASIC4.1□□□□□ -1.75
CDKL3Q8IVW4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC007685.1-201ENST00000329806 452 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 RCC2P2-201ENST00000422174 918 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 MTCO3P21-201ENST00000430791 643 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 ATP5HP2-201ENST00000433885 485 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 RPL5P32-201ENST00000454085 879 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AL132838.2-201ENST00000492041 314 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC146944.2-203ENST00000502493 354 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC010627.1-201ENST00000503819 1294 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC139495.1-202ENST00000513164 354 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 FTH1P9-201ENST00000513251 355 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 RNU6-319P-201ENST00000516025 108 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 C1GALT1P3-201ENST00000522049 819 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC091516.1-201ENST00000549191 703 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC023575.1-201ENST00000580510 358 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 RN7SL600P-201ENST00000581811 299 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC007423.1-201ENST00000605009 627 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AC034236.3-201ENST00000605999 461 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 AL139089.1-201ENST00000620372 975 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 MFSD8-220ENST00000641243 1422 ntBASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.09□□□□□ -1.75
CDKL3Q8IVW4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDKL3Q8IVW4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CDKL3Q8IVW4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CDKL3Q8IVW4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.09□□□□□ -1.76
CDKL3Q8IVW4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.09□□□□□ -1.76
CDKL3Q8IVW4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 MTND2P11-201ENST00000423638 648 ntBASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AL139811.1-201ENST00000424779 2299 ntBASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 UBE2V2P1-201ENST00000434717 398 ntBASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AC083863.1-201ENST00000438811 231 ntBASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 MTND2P25-201ENST00000449028 610 ntBASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AC011037.1-201ENST00000483964 558 ntBASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AC106872.2-201ENST00000494303 480 ntBASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 ABI1P1-201ENST00000603375 1120 ntBASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDKL3Q8IVW4 AC007342.7-201ENST00000624610 2337 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 RNA5SP399-201ENST00000364003 117 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 MIR92A2-201ENST00000385299 75 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 AC115285.1-201ENST00000424879 736 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 NUTF2P3-201ENST00000448540 384 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 RPS11P1-201ENST00000451072 473 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 RPL7P24-201ENST00000493052 752 ntBASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.07□□□□□ -1.76
CDKL3Q8IVW4 AC010342.1-201ENST00000514047 877 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms