Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.56□□□□□ -2
CSMD3Q7Z407 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.56□□□□□ -2
CSMD3Q7Z407 AC007066.2-202ENST00000566531 914 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.56□□□□□ -2
CSMD3Q7Z407 AL451044.1-201ENST00000604867 238 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC2.56□□□□□ -2
CSMD3Q7Z407 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC2.56□□□□□ -2
CSMD3Q7Z407 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
CSMD3Q7Z407 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC2.56□□□□□ -2
CSMD3Q7Z407 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC2.56□□□□□ -2
CSMD3Q7Z407 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC2.56□□□□□ -2
CSMD3Q7Z407 UBA52P6-201ENST00000399822 382 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 SKP1P3-201ENST00000429280 487 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 UBE2V1P1-201ENST00000430836 445 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 RPL23AP69-201ENST00000431134 458 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 RPL21P110-201ENST00000433345 446 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.56□□□□□ -2
CSMD3Q7Z407 NPM1P28-201ENST00000492269 840 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 RN7SL504P-201ENST00000494496 287 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 IGKV1OR2-1-201ENST00000514060 354 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 UBE2NP1-201ENST00000545592 458 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC2.56□□□□□ -2
CSMD3Q7Z407 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.56□□□□□ -2
CSMD3Q7Z407 AC084036.1-201ENST00000609190 508 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 AC026368.1-201ENST00000614934 690 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
CSMD3Q7Z407 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CSMD3Q7Z407 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC2.56□□□□□ -2
CSMD3Q7Z407 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CSMD3Q7Z407 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC2.56□□□□□ -2
CSMD3Q7Z407 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC2.56□□□□□ -2
CSMD3Q7Z407 MIR449A-201ENST00000362113 91 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 GSTA8P-201ENST00000404253 637 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 NPM1P25-201ENST00000429734 854 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.56□□□□□ -2
CSMD3Q7Z407 SETD6P1-201ENST00000444575 317 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 EIF4A1P11-201ENST00000451239 222 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 KC877373.1-201ENST00000479066 408 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 ATP6V1G1P6-201ENST00000504007 334 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 SNORA70.17-201ENST00000516449 133 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC2.56□□□□□ -2
CSMD3Q7Z407 AC092747.2-201ENST00000545069 983 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 NCAPGP2-201ENST00000557911 754 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.56□□□□□ -2
CSMD3Q7Z407 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.56□□□□□ -2
CSMD3Q7Z407 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 SMG1P4-204ENST00000523028 4131 ntBASIC2.56□□□□□ -2
CSMD3Q7Z407 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.56□□□□□ -2
CSMD3Q7Z407 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD3Q7Z407 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
CSMD3Q7Z407 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CSMD3Q7Z407 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.55□□□□□ -2
CSMD3Q7Z407 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.55□□□□□ -2
CSMD3Q7Z407 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.55□□□□□ -2
CSMD3Q7Z407 RPS26P2-201ENST00000440331 348 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 RPL27AP5-201ENST00000469428 449 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC2.55□□□□□ -2
CSMD3Q7Z407 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC2.55□□□□□ -2
CSMD3Q7Z407 AC010503.3-201ENST00000594355 540 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC006386.2-201ENST00000624491 75 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC012005.1-201ENST00000624575 75 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 AC093535.2-201ENST00000624769 2326 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
CSMD3Q7Z407 AL356274.2-201ENST00000624379 3752 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.55□□□□□ -2
CSMD3Q7Z407 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.55□□□□□ -2
CSMD3Q7Z407 GTF3AP5-201ENST00000442645 697 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.55□□□□□ -2
CSMD3Q7Z407 AC108941.1-201ENST00000502853 530 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC2.55□□□□□ -2
CSMD3Q7Z407 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.55□□□□□ -2
CSMD3Q7Z407 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC2.55□□□□□ -2
CSMD3Q7Z407 RNU6-237P-201ENST00000515985 71 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 OR5M7P-201ENST00000526140 972 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC010591.1-201ENST00000603941 649 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC008966.2-201ENST00000606157 453 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AL139089.1-201ENST00000620372 975 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.55□□□□□ -2
CSMD3Q7Z407 Z95114.1-201ENST00000624264 14574 ntBASIC2.55□□□□□ -2
CSMD3Q7Z407 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.55□□□□□ -2
CSMD3Q7Z407 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD3Q7Z407 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC2.55□□□□□ -2
CSMD3Q7Z407 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms