Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RGS17P1-201ENST00000423358 553 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AL645608.4-201ENST00000423619 154 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AL360081.1-201ENST00000428299 555 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 OR2B7P-201ENST00000429302 934 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 FABP7P2-201ENST00000429946 379 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 FTH1P6-201ENST00000430768 320 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 CDY14P-201ENST00000431260 1014 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AL049745.1-201ENST00000433953 286 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 CDY12P-201ENST00000440679 1015 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 CDY13P-201ENST00000445813 1015 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 CDY23P-201ENST00000451661 1014 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 CEACAMP6-201ENST00000452007 574 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 SBDSP1-204ENST00000453858 737 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 RPL35AP28-201ENST00000459730 331 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC018797.3-201ENST00000513388 1241 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 SCARNA1-201ENST00000517138 166 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC138701.1-201ENST00000524329 714 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 CYB5AP5-201ENST00000549779 389 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AL442163.2-201ENST00000553912 710 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC005255.1-201ENST00000593748 216 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AP000240.1-201ENST00000609910 452 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 Mico1.1-201ENST00000611698 204 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AL359535.1-201ENST00000612100 1087 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AL158196.1-201ENST00000616786 434 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 C2orf27A-204ENST00000623058 969 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC017104.5-201ENST00000637647 639 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 AC073055.1-201ENST00000456901 1621 ntBASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
NUP54Q7Z3B4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 RNA5SP502-201ENST00000362694 119 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 RNU5B-1-201ENST00000363286 116 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 RNU6-1339P-201ENST00000363574 91 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AL080315.1-201ENST00000406055 466 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC096533.1-201ENST00000411645 353 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC004074.1-201ENST00000421810 1063 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 RPL7P57-201ENST00000423238 740 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 YWHAEP5-201ENST00000431545 765 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC005154.2-201ENST00000438110 379 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC004938.1-201ENST00000438468 308 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC092809.1-201ENST00000441469 474 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 SEPT14P24-201ENST00000447236 180 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 RPL29P29-201ENST00000448725 423 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 OR51B8P-201ENST00000449892 769 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC133473.1-201ENST00000455173 299 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 SNRPGP5-201ENST00000456003 220 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 RNA5SP103-201ENST00000459503 118 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC011005.3-201ENST00000491624 395 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC098799.3-201ENST00000506095 438 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 IGBP1P5-201ENST00000507524 1000 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 HMGB1P23-201ENST00000518743 568 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 HMGB1P1-201ENST00000522557 636 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC093249.4-201ENST00000564755 259 ntBASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUP54Q7Z3B4 AC100827.5-201ENST00000615883 426 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms