Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC027290.2-201ENST00000623210 18662 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 RNA5SP388-201ENST00000362584 119 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 RNA5SP130-201ENST00000364431 114 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 RNU1-13P-201ENST00000384499 162 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 RNA5SP105-201ENST00000391123 113 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 XKRY2-201ENST00000442362 1093 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 CYCSP53-201ENST00000455540 265 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC037198.2-201ENST00000478845 733 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC025768.1-201ENST00000510057 267 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 VWA8P1-201ENST00000510889 176 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC093770.1-201ENST00000511559 571 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 IGHV3-63-201ENST00000518422 341 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC109635.6-201ENST00000525487 1113 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 UBTFL9-201ENST00000534504 1148 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC018552.3-201ENST00000567416 561 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC017076.1-201ENST00000607613 578 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC005021.1-201ENST00000608730 355 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 CR589904.2-201ENST00000612533 440 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AP003400.6-201ENST00000624698 740 ntBASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.32□□□□□ -1.72
RFWD3Q6PCD5 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 SPRR2C-201ENST00000290702 219 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 SNORD115-48-201ENST00000364764 76 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 MIR708-201ENST00000390708 88 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 RNU11-4P-201ENST00000391149 133 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 MIR1193-201ENST00000408109 78 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 OR8G2P-201ENST00000412796 908 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AL356095.1-201ENST00000417217 199 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 MTND4P24-201ENST00000424002 397 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 MTND4LP13-201ENST00000425022 298 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 ZNF965P-201ENST00000432501 817 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 RPL23AP46-201ENST00000438548 490 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AL627224.1-201ENST00000448334 444 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 MTND2P30-201ENST00000456663 382 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AL133477.1-201ENST00000457472 514 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 RPL23AP2-201ENST00000471227 466 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 LARP7P4-201ENST00000481075 878 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 MTND1P36-201ENST00000522384 936 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 TMF1P1-201ENST00000576058 373 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 BMS1P7-201ENST00000602440 1052 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AL671309.1-201ENST00000603750 544 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 MIR432-201ENST00000606207 94 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AC135803.1-201ENST00000608748 565 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AL133445.2-201ENST00000611191 527 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AP006248.2-201ENST00000623309 592 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AC080188.3-201ENST00000624842 748 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 RNA5SP196-201ENST00000625967 102 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 AL451142.2-201ENST00000429076 2090 ntBASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFWD3Q6PCD5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms