Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ATP5F1P4-201ENST00000397288 746 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 NRBF2P2-201ENST00000413087 861 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AC002075.2-201ENST00000425207 252 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 NEK4P1-201ENST00000433383 879 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 MTCO1P52-201ENST00000433928 531 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 HMGB1P37-201ENST00000439613 609 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AC009963.2-201ENST00000453431 138 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AC092691.2-201ENST00000461787 803 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 RN7SL354P-201ENST00000469282 294 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 RPL23AP44-201ENST00000482216 473 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AC083982.1-201ENST00000485679 344 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AF213884.1-201ENST00000488102 463 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AC004069.2-201ENST00000505438 1114 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AC008958.1-201ENST00000511047 682 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 PHBP14-201ENST00000512887 367 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 TRAV8-5-201ENST00000537369 341 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 MIR5684-201ENST00000585074 65 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 FAM25E-202ENST00000608562 189 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 SDR42E1P1-201ENST00000611327 477 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AL591424.2-201ENST00000617023 128 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 AC124312.6-202ENST00000623624 418 ntBASIC3.55□□□□□ -1.84
CCDC58Q4VC31 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC58Q4VC31 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 CUL4AP1-201ENST00000514750 1863 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC138393.1-206ENST00000540997 1886 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 MIR105-2-201ENST00000385083 81 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 RNU4-25P-201ENST00000410569 230 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 RNU2-37P-201ENST00000410695 177 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AL360081.1-201ENST00000428299 555 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 UBE2V2P1-201ENST00000434717 398 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 RPL12P3-201ENST00000440080 396 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC073264.2-201ENST00000448886 166 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 KRT19P6-201ENST00000510983 209 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC099522.1-202ENST00000514718 367 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 MTCO1P30-201ENST00000515244 580 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 RNU2-58P-201ENST00000516403 183 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC010476.1-201ENST00000519111 851 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 OR8G5-201ENST00000524943 1041 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AL161713.1-201ENST00000555538 145 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AL133457.1-201ENST00000564251 987 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC025627.2-201ENST00000576220 160 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 RPL12P25-202ENST00000598100 674 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC011816.2-201ENST00000607089 556 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC006946.3-201ENST00000609791 756 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AL161616.1-201ENST00000611867 286 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AL356274.1-201ENST00000617064 410 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 OR10AB1P-202ENST00000641219 1686 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC58Q4VC31 MFSD8-236ENST00000641509 4050 ntBASIC3.54□□□□□ -1.84
CCDC58Q4VC31 AC021755.1-201ENST00000559747 1447 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AC119744.1-201ENST00000454746 1715 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AC005183.1-201ENST00000603687 1979 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AC079741.1-201ENST00000321498 212 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 HLFP1-201ENST00000402375 499 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 HMGB3P19-201ENST00000403971 560 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 NPM1P34-201ENST00000428821 893 ntBASIC3.53□□□□□ -1.84
CCDC58Q4VC31 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC58Q4VC31 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms