Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL139128.1-201ENST00000413921 941 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 AC093162.1-201ENST00000419682 124 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 SDCBPP2-201ENST00000424643 885 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 AL590103.1-201ENST00000434488 307 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 APOOP2-201ENST00000461561 539 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 SNX5P1-201ENST00000505757 1041 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 MTCO3P28-201ENST00000513351 515 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 AP000790.1-201ENST00000528891 737 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 AC090502.2-201ENST00000549267 280 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 AC090527.3-201ENST00000619041 548 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 THAP12P5-201ENST00000405864 2275 ntBASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
CCDC144BQ3MJ40 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 Y_RNA.18-201ENST00000362461 102 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 MIR649-201ENST00000384843 97 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 RPS3AP9-201ENST00000417027 792 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AL358176.3-201ENST00000420757 454 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 NIPA2P1-201ENST00000426223 976 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 MTCYBP39-201ENST00000437562 491 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 RPL18AP17-201ENST00000455326 198 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 MTCO3P2-201ENST00000457365 171 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC112206.1-201ENST00000468416 477 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 CCDC75P1-201ENST00000469247 791 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 ATP5LP5-201ENST00000483050 299 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 IGBP1P4-201ENST00000503202 879 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC027369.5-201ENST00000533838 755 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 LSM6P2-201ENST00000552208 177 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 NMNAT1P5-201ENST00000559657 841 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC107982.3-201ENST00000584957 985 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 NBR2-204ENST00000587322 63 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC010738.1-201ENST00000604970 987 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AP001521.1-201ENST00000609150 300 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AF246928.1-201ENST00000623768 87 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC073530.2-201ENST00000623987 261 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 SAGE2P-201ENST00000420011 2126 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 AC114947.2-201ENST00000565748 2125 ntBASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC144BQ3MJ40 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 SNORD116-9-201ENST00000384000 95 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 SNORD116-3-201ENST00000384287 95 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 RNU6-921P-201ENST00000384361 107 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 SNORD116-7-201ENST00000384404 95 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 SNORD116-5-201ENST00000384462 95 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 ATP5F1P4-201ENST00000397288 746 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 AC004022.2-201ENST00000413824 193 ntBASIC6.12□□□□□ -1.43
CCDC144BQ3MJ40 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms