Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 S100A11P1-201ENST00000477525 312 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 RNU6-362P-201ENST00000516736 90 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 IGLV3-26-201ENST00000520756 302 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 GLRXP2-201ENST00000555594 321 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 MIR5685-201ENST00000579080 79 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 AC107982.3-201ENST00000584957 985 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 AC245128.3-201ENST00000594721 748 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 BNIP3P33-201ENST00000598912 569 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 MTCO2P22-201ENST00000603246 681 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 AL096803.3-201ENST00000609032 532 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 AL138721.1-201ENST00000616756 179 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 AC140113.4-201ENST00000622087 222 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 AC034229.5-201ENST00000624258 185 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 LINC01355-201ENST00000566551 5444 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 AC092162.3-201ENST00000624511 1624 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 OR10J6P-201ENST00000289731 930 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 AC067945.1-201ENST00000342609 618 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 RNU6-213P-201ENST00000384051 104 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 MIR1179-201ENST00000408703 91 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 HMGB3P5-201ENST00000428894 612 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 MTCO1P45-201ENST00000431457 267 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 AL157884.3-201ENST00000448273 1184 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 HMGB3P21-201ENST00000452483 547 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 RPL38P1-201ENST00000460914 211 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 AP002812.1-201ENST00000495378 474 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 AC022790.1-201ENST00000522872 204 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 RPL23AP87-202ENST00000573039 466 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 FP236240.3-201ENST00000623061 327 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 AC104820.1-201ENST00000624183 307 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 NEAT1-202ENST00000501122 22743 ntBASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHROOM1Q2M3G4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 SNORA62.3-201ENST00000365110 153 ntBASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 RN7SKP199-201ENST00000410325 305 ntBASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 RNA5SP498-201ENST00000411342 120 ntBASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 RPS3AP25-201ENST00000411660 793 ntBASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 AC073587.1-201ENST00000447093 876 ntBASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 VN1R84P-201ENST00000593697 235 ntBASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 AC090246.1-201ENST00000616499 426 ntBASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.77□□□□□ -1.65
SHROOM1Q2M3G4 CR392039.5-201ENST00000623201 510 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms