Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 AC092681.1-201ENST00000297369 291 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
FOXF2Q12947 MIR525-201ENST00000384978 85 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 MIR550A3-201ENST00000390735 95 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 RPS15AP38-201ENST00000413110 372 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXF2Q12947 AL109913.1-201ENST00000421173 514 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 DPY19L1P2-201ENST00000426647 915 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.67□□□□□ -1.66
FOXF2Q12947 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF2Q12947 B3GNT2P1-201ENST00000434960 952 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 FTH1P16-201ENST00000435241 552 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 NDUFB4P8-201ENST00000435351 367 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXF2Q12947 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.67□□□□□ -1.66
FOXF2Q12947 AL645937.3-201ENST00000453647 936 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF2Q12947 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXF2Q12947 PPP1R11P1-201ENST00000486095 376 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF2Q12947 AC090071.1-201ENST00000507713 644 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF2Q12947 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXF2Q12947 RNU6-506P-201ENST00000516553 94 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXF2Q12947 AC092709.1-201ENST00000521355 1045 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.67□□□□□ -1.66
FOXF2Q12947 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXF2Q12947 OR4C2P-201ENST00000530855 1064 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 AC092490.3-201ENST00000545370 572 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXF2Q12947 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXF2Q12947 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXF2Q12947 MIR4646-201ENST00000580775 63 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 MIR4436B2-201ENST00000581415 91 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 MIR4436B1-201ENST00000583272 91 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 AL159169.3-201ENST00000608871 561 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 AC069209.1-201ENST00000619282 651 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF2Q12947 AC004009.2-201ENST00000623016 728 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 AC099654.6-201ENST00000636487 512 ntBASIC4.67□□□□□ -1.66
FOXF2Q12947 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
FOXF2Q12947 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF2Q12947 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
FOXF2Q12947 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXF2Q12947 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
FOXF2Q12947 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXF2Q12947 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF2Q12947 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF2Q12947 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF2Q12947 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF2Q12947 AC112255.1-201ENST00000624070 2493 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXF2Q12947 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF2Q12947 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF2Q12947 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF2Q12947 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXF2Q12947 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
FOXF2Q12947 FGF7P2-201ENST00000332473 296 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 Y_RNA.61-201ENST00000362835 102 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 U3.3-201ENST00000362986 216 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 SNORA72.1-201ENST00000363485 129 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 SNORD65.1-201ENST00000390889 71 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXF2Q12947 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.66□□□□□ -1.66
FOXF2Q12947 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXF2Q12947 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXF2Q12947 DPPA2P2-201ENST00000418220 897 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 MRPS36P1-201ENST00000421291 307 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
FOXF2Q12947 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF2Q12947 EI24P4-201ENST00000423683 1078 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 RPL7P44-201ENST00000424827 742 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 USP9YP18-201ENST00000425912 695 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXF2Q12947 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXF2Q12947 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXF2Q12947 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXF2Q12947 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXF2Q12947 TCEA1P3-201ENST00000443005 880 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXF2Q12947 OR6C5P-201ENST00000452388 923 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXF2Q12947 RPL35AP28-201ENST00000459730 331 ntBASIC4.66□□□□□ -1.66
FOXF2Q12947 RN7SL197P-201ENST00000466981 299 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms