Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXF1Q12946 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXF1Q12946 RNU6-984P-201ENST00000363236 109 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 U1.1-201ENST00000384101 164 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 RNU6-178P-201ENST00000384631 104 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 SNORA57.1-201ENST00000391227 145 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 ATP5HP2-201ENST00000433885 485 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.47□□□□□ -1.85
FOXF1Q12946 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.47□□□□□ -1.85
FOXF1Q12946 AL500522.2-201ENST00000448562 343 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 AL162388.1-201ENST00000450912 352 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 AC107015.1-201ENST00000466902 747 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 GAPDHP36-201ENST00000480688 918 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 AL139099.1-201ENST00000497398 403 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 RAC1P2-201ENST00000511164 579 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
FOXF1Q12946 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXF1Q12946 NDUFB4P12-201ENST00000513465 390 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 AC026402.1-201ENST00000513642 170 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 RNA5SP208-201ENST00000516156 78 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXF1Q12946 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.47□□□□□ -1.85
FOXF1Q12946 AC087499.8-201ENST00000578406 226 ntBASIC3.47□□□□□ -1.85
FOXF1Q12946 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.47□□□□□ -1.85
FOXF1Q12946 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.47□□□□□ -1.85
FOXF1Q12946 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXF1Q12946 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXF1Q12946 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.47□□□□□ -1.85
FOXF1Q12946 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.47□□□□□ -1.85
FOXF1Q12946 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
FOXF1Q12946 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
FOXF1Q12946 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.46□□□□□ -1.86
FOXF1Q12946 CUL4AP1-201ENST00000514750 1863 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
FOXF1Q12946 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.46□□□□□ -1.86
FOXF1Q12946 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
FOXF1Q12946 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
FOXF1Q12946 RN7SKP280-201ENST00000364196 304 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 MIR30B-201ENST00000384850 88 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 ZNF602P-201ENST00000405929 924 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 AMD1P2-201ENST00000412936 992 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 AC010740.1-201ENST00000417035 684 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FOXF1Q12946 AC093698.1-201ENST00000423843 571 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.46□□□□□ -1.86
FOXF1Q12946 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.46□□□□□ -1.86
FOXF1Q12946 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.46□□□□□ -1.86
FOXF1Q12946 RPL21P133-201ENST00000443666 476 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 AC239809.1-201ENST00000450470 217 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
FOXF1Q12946 AC084198.1-201ENST00000477747 402 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 RN7SL809P-201ENST00000482040 297 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 AC109458.1-201ENST00000508858 316 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 SCARNA14-201ENST00000516903 136 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.46□□□□□ -1.86
FOXF1Q12946 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FOXF1Q12946 CYCSP30-201ENST00000546447 172 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 DUX4L52-201ENST00000549363 777 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.46□□□□□ -1.86
FOXF1Q12946 AC122134.1-201ENST00000565664 1104 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 MIR5685-201ENST00000579080 79 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 AC090912.3-201ENST00000609775 533 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.46□□□□□ -1.86
FOXF1Q12946 AC005344.1-201ENST00000613391 459 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.46□□□□□ -1.86
FOXF1Q12946 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
FOXF1Q12946 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
FOXF1Q12946 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
FOXF1Q12946 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
FOXF1Q12946 RLIMP2-201ENST00000427891 1563 ntBASIC3.46□□□□□ -1.86
FOXF1Q12946 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
FOXF1Q12946 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
FOXF1Q12946 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
FOXF1Q12946 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.45□□□□□ -1.86
FOXF1Q12946 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
FOXF1Q12946 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.45□□□□□ -1.86
FOXF1Q12946 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
FOXF1Q12946 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
FOXF1Q12946 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.45□□□□□ -1.86
FOXF1Q12946 TCEA1P4-201ENST00000415066 844 ntBASIC3.45□□□□□ -1.86
FOXF1Q12946 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
FOXF1Q12946 AC106901.1-201ENST00000425086 698 ntBASIC3.45□□□□□ -1.86
FOXF1Q12946 YWHAQP9-201ENST00000445891 512 ntBASIC3.45□□□□□ -1.86
FOXF1Q12946 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.45□□□□□ -1.86
FOXF1Q12946 STRADBP1-201ENST00000478954 1281 ntBASIC3.45□□□□□ -1.86
FOXF1Q12946 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.45□□□□□ -1.86
FOXF1Q12946 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.45□□□□□ -1.86
FOXF1Q12946 AC010342.1-201ENST00000514047 877 ntBASIC3.45□□□□□ -1.86
FOXF1Q12946 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.45□□□□□ -1.86
FOXF1Q12946 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.45□□□□□ -1.86
FOXF1Q12946 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.45□□□□□ -1.86
FOXF1Q12946 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.45□□□□□ -1.86
FOXF1Q12946 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.45□□□□□ -1.86
FOXF1Q12946 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.45□□□□□ -1.86
FOXF1Q12946 HSPE1P5-201ENST00000561489 272 ntBASIC3.45□□□□□ -1.86
FOXF1Q12946 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.45□□□□□ -1.86
FOXF1Q12946 AL713998.2-201ENST00000604538 1198 ntBASIC3.45□□□□□ -1.86
FOXF1Q12946 AL354760.1-201ENST00000608357 643 ntBASIC3.45□□□□□ -1.86
FOXF1Q12946 AC096586.2-201ENST00000610260 441 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms