Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
GABPAQ06546 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GABPAQ06546 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GABPAQ06546 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.7□□□□□ -1.66
GABPAQ06546 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.7□□□□□ -1.66
GABPAQ06546 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
GABPAQ06546 RPL26P37-201ENST00000411983 438 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 MTATP6P19-201ENST00000413797 659 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 AC022022.1-201ENST00000430304 178 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 AC083863.1-201ENST00000438811 231 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 AL500522.2-201ENST00000448562 343 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 MTND5P8-201ENST00000449817 1083 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.7□□□□□ -1.66
GABPAQ06546 AC006517.1-201ENST00000480485 328 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 GAPDHP36-201ENST00000480688 918 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.7□□□□□ -1.66
GABPAQ06546 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GABPAQ06546 RNU1-45P-201ENST00000517191 141 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.7□□□□□ -1.66
GABPAQ06546 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.7□□□□□ -1.66
GABPAQ06546 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.7□□□□□ -1.66
GABPAQ06546 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.7□□□□□ -1.66
GABPAQ06546 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.7□□□□□ -1.66
GABPAQ06546 AC090312.1-201ENST00000580637 348 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.7□□□□□ -1.66
GABPAQ06546 AC107982.3-201ENST00000584957 985 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.7□□□□□ -1.66
GABPAQ06546 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.7□□□□□ -1.66
GABPAQ06546 AC005255.1-201ENST00000593748 216 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 AL355802.4-201ENST00000607635 548 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GABPAQ06546 FP236240.3-201ENST00000623061 327 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 AC110792.3-201ENST00000595906 1614 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
GABPAQ06546 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
GABPAQ06546 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GABPAQ06546 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
GABPAQ06546 CYP1D1P-201ENST00000416662 1433 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GABPAQ06546 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GABPAQ06546 AC083843.3-201ENST00000623679 2186 ntBASIC4.7□□□□□ -1.66
GABPAQ06546 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
GABPAQ06546 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.69□□□□□ -1.66
GABPAQ06546 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GABPAQ06546 AC017002.4-201ENST00000604721 1525 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.69□□□□□ -1.66
GABPAQ06546 RNU6-40P-201ENST00000384254 107 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GABPAQ06546 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.69□□□□□ -1.66
GABPAQ06546 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.69□□□□□ -1.66
GABPAQ06546 FAR1P1-201ENST00000427163 934 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 AC007389.2-201ENST00000434630 306 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GABPAQ06546 RPS15AP29-201ENST00000445539 400 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 RPL7L1P1-201ENST00000448259 785 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 MTND2P25-201ENST00000449028 610 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.69□□□□□ -1.66
GABPAQ06546 NANOGP10-201ENST00000453325 895 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.69□□□□□ -1.66
GABPAQ06546 AC021205.1-201ENST00000468797 348 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 RN7SL271P-201ENST00000487601 295 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 HMGB1P23-201ENST00000518743 568 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.69□□□□□ -1.66
GABPAQ06546 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.69□□□□□ -1.66
GABPAQ06546 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.69□□□□□ -1.66
GABPAQ06546 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.69□□□□□ -1.66
GABPAQ06546 AC074050.1-201ENST00000563247 211 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.69□□□□□ -1.66
GABPAQ06546 AL137072.1-201ENST00000603444 466 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 AL451044.1-201ENST00000604867 238 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 AC034236.3-201ENST00000605999 461 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 AL645927.2-201ENST00000618350 349 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 DDX18P4-201ENST00000511690 1966 ntBASIC4.69□□□□□ -1.66
GABPAQ06546 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GABPAQ06546 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.69□□□□□ -1.66
GABPAQ06546 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.69□□□□□ -1.66
GABPAQ06546 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.68□□□□□ -1.66
GABPAQ06546 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.68□□□□□ -1.66
GABPAQ06546 HSPA8P17-201ENST00000427029 1382 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
GABPAQ06546 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
GABPAQ06546 RNA5SP124-201ENST00000362739 110 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 MIR554-201ENST00000384874 96 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 ATP5F1P3-201ENST00000397213 657 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 AL034374.1-201ENST00000406329 351 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.68□□□□□ -1.66
GABPAQ06546 AL450992.3-201ENST00000413192 568 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.68□□□□□ -1.66
GABPAQ06546 AL389915.1-201ENST00000422463 466 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 HLA-N-201ENST00000437516 135 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.68□□□□□ -1.66
GABPAQ06546 RPS20P21-201ENST00000466859 343 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.68□□□□□ -1.66
GABPAQ06546 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.68□□□□□ -1.66
GABPAQ06546 RN7SL585P-201ENST00000470538 280 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
GABPAQ06546 AP002812.1-201ENST00000495378 474 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.68□□□□□ -1.66
GABPAQ06546 MTCO1P31-201ENST00000506355 492 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms