Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MTCO3P20-201ENST00000454926 688 ntBASIC3.1□□□□□ -1.91
HIST1H1AQ02539 CFTRP1-201ENST00000456646 183 ntBASIC3.1□□□□□ -1.91
HIST1H1AQ02539 RN7SL330P-201ENST00000469709 307 ntBASIC3.1□□□□□ -1.91
HIST1H1AQ02539 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.1□□□□□ -1.91
HIST1H1AQ02539 RN7SL271P-201ENST00000487601 295 ntBASIC3.1□□□□□ -1.91
HIST1H1AQ02539 AC007686.1-201ENST00000488511 463 ntBASIC3.1□□□□□ -1.91
HIST1H1AQ02539 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.1□□□□□ -1.91
HIST1H1AQ02539 AC093840.1-201ENST00000511599 336 ntBASIC3.1□□□□□ -1.91
HIST1H1AQ02539 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.1□□□□□ -1.91
HIST1H1AQ02539 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.1□□□□□ -1.91
HIST1H1AQ02539 RPL23AP87-202ENST00000573039 466 ntBASIC3.1□□□□□ -1.91
HIST1H1AQ02539 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.1□□□□□ -1.91
HIST1H1AQ02539 AC022146.1-201ENST00000595307 847 ntBASIC3.1□□□□□ -1.91
HIST1H1AQ02539 MRPS35P3-201ENST00000603189 709 ntBASIC3.1□□□□□ -1.91
HIST1H1AQ02539 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.1□□□□□ -1.91
HIST1H1AQ02539 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H1AQ02539 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H1AQ02539 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.1□□□□□ -1.91
HIST1H1AQ02539 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AL133383.2-201ENST00000622958 2336 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 HMGN2P8-201ENST00000391458 268 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 RPS4XP9-201ENST00000405151 780 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 RN7SKP182-201ENST00000410772 298 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AC009480.2-201ENST00000422916 432 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AL049610.1-201ENST00000423374 372 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 VDAC1P6-201ENST00000430062 855 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 MTCO3P21-201ENST00000430791 643 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 SERPINA7P1-201ENST00000443077 631 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 VN1R25P-201ENST00000443385 738 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 VN1R40P-201ENST00000455196 941 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 SNORD108-201ENST00000459332 71 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 RPL23AP14-201ENST00000468281 468 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 SNRPGP3-201ENST00000469405 227 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AC109327.1-201ENST00000471666 403 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 TMED11P-201ENST00000479478 690 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AC008958.1-201ENST00000511047 682 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 OR8G5-201ENST00000524943 1041 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 GNRHR2P1-201ENST00000555315 631 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AC005191.1-201ENST00000603950 358 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AP000255.1-201ENST00000610276 676 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AL591424.2-201ENST00000617023 128 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AC095038.2-201ENST00000621464 1070 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AP000346.3-201ENST00000622821 210 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AC073342.3-201ENST00000624211 193 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 U6.98-201ENST00000637157 84 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AL773545.4-201ENST00000637262 310 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 AL513478.4-201ENST00000641636 310 ntBASIC3.09□□□□□ -1.91
HIST1H1AQ02539 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H1AQ02539 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.09□□□□□ -1.92
HIST1H1AQ02539 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
HIST1H1AQ02539 MFSD8-216ENST00000641147 4009 ntBASIC3.09□□□□□ -1.92
HIST1H1AQ02539 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AP001148.1-201ENST00000624124 2359 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC139713.2-214ENST00000642059 1811 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 IPO8P1-201ENST00000455509 3109 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 MIR124-3-201ENST00000384866 87 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC127526.1-201ENST00000417526 366 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 FAR2P4-202ENST00000425399 584 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 COX6B1P7-201ENST00000430845 235 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 MTCO1P52-201ENST00000433928 531 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC083863.1-201ENST00000438811 231 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 ACTR3P2-201ENST00000439585 1257 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 CBX1P1-201ENST00000440184 427 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 HMGB3P8-201ENST00000449709 577 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC009963.2-201ENST00000453431 138 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 RPL31P61-201ENST00000496160 376 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC231760.1-201ENST00000498002 260 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 UBE2CP3-201ENST00000502715 450 ntBASIC3.08□□□□□ -1.92
HIST1H1AQ02539 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
HIST1H1AQ02539 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms