Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RN7SL629P-201ENST00000489622 285 ntBASIC4.23□□□□□ -1.73
CBX1P83916 AC072052.1-201ENST00000496556 306 ntBASIC4.23□□□□□ -1.73
CBX1P83916 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.23□□□□□ -1.73
CBX1P83916 AC025459.1-201ENST00000504072 156 ntBASIC4.23□□□□□ -1.73
CBX1P83916 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.23□□□□□ -1.73
CBX1P83916 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.23□□□□□ -1.73
CBX1P83916 IGKV1-32-201ENST00000519290 311 ntBASIC4.23□□□□□ -1.73
CBX1P83916 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.23□□□□□ -1.73
CBX1P83916 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.23□□□□□ -1.73
CBX1P83916 OR5BC1P-201ENST00000529327 739 ntBASIC4.23□□□□□ -1.73
CBX1P83916 AC092747.2-201ENST00000545069 983 ntBASIC4.23□□□□□ -1.73
CBX1P83916 HAUS8P1-201ENST00000549005 542 ntBASIC4.23□□□□□ -1.73
CBX1P83916 NOP56P3-201ENST00000549457 385 ntBASIC4.23□□□□□ -1.73
CBX1P83916 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.23□□□□□ -1.73
CBX1P83916 MIR4489-201ENST00000578869 62 ntBASIC4.23□□□□□ -1.73
CBX1P83916 VN1R84P-201ENST00000593697 235 ntBASIC4.23□□□□□ -1.73
CBX1P83916 AC025175.1-201ENST00000606482 759 ntBASIC4.23□□□□□ -1.73
CBX1P83916 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.23□□□□□ -1.73
CBX1P83916 AL450489.1-201ENST00000612071 468 ntBASIC4.23□□□□□ -1.73
CBX1P83916 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.23□□□□□ -1.73
CBX1P83916 AC000123.2-201ENST00000623124 461 ntBASIC4.23□□□□□ -1.73
CBX1P83916 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.23□□□□□ -1.73
CBX1P83916 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
CBX1P83916 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CBX1P83916 AC006042.3-201ENST00000454684 1469 ntBASIC4.23□□□□□ -1.73
CBX1P83916 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CBX1P83916 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CBX1P83916 RNU6-328P-201ENST00000390887 106 ntBASIC4.22□□□□□ -1.73
CBX1P83916 SNRPFP1-201ENST00000414761 252 ntBASIC4.22□□□□□ -1.73
CBX1P83916 AC093162.1-201ENST00000419682 124 ntBASIC4.22□□□□□ -1.73
CBX1P83916 RPL31P12-201ENST00000422587 358 ntBASIC4.22□□□□□ -1.73
CBX1P83916 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.22□□□□□ -1.73
CBX1P83916 ARF4P2-201ENST00000430209 526 ntBASIC4.22□□□□□ -1.73
CBX1P83916 TRIM60P13-201ENST00000432350 1283 ntBASIC4.22□□□□□ -1.73
CBX1P83916 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.22□□□□□ -1.73
CBX1P83916 RPL7P31-201ENST00000450192 724 ntBASIC4.22□□□□□ -1.73
CBX1P83916 AURKAPS2-201ENST00000454983 333 ntBASIC4.22□□□□□ -1.73
CBX1P83916 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.22□□□□□ -1.73
CBX1P83916 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.22□□□□□ -1.73
CBX1P83916 RPS23P1-201ENST00000491662 432 ntBASIC4.22□□□□□ -1.73
CBX1P83916 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.22□□□□□ -1.73
CBX1P83916 AC004980.4-201ENST00000513375 203 ntBASIC4.22□□□□□ -1.73
CBX1P83916 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CBX1P83916 OR5AN2P-201ENST00000534535 896 ntBASIC4.22□□□□□ -1.73
CBX1P83916 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CBX1P83916 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.22□□□□□ -1.73
CBX1P83916 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.22□□□□□ -1.73
CBX1P83916 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.22□□□□□ -1.73
CBX1P83916 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.22□□□□□ -1.73
CBX1P83916 AC103710.3-201ENST00000608157 948 ntBASIC4.22□□□□□ -1.73
CBX1P83916 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.22□□□□□ -1.73
CBX1P83916 AC091905.1-201ENST00000624400 311 ntBASIC4.22□□□□□ -1.73
CBX1P83916 CR392039.4-201ENST00000624968 501 ntBASIC4.22□□□□□ -1.73
CBX1P83916 LINC01808-202ENST00000641680 1116 ntBASIC4.22□□□□□ -1.73
CBX1P83916 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CBX1P83916 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.22□□□□□ -1.73
CBX1P83916 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CBX1P83916 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CBX1P83916 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CBX1P83916 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CBX1P83916 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CBX1P83916 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CBX1P83916 RARSP1-201ENST00000542842 1418 ntBASIC4.21□□□□□ -1.73
CBX1P83916 AL353743.4-201ENST00000422653 1547 ntBASIC4.21□□□□□ -1.73
CBX1P83916 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.21□□□□□ -1.74
CBX1P83916 AC022893.2-201ENST00000564832 3296 ntBASIC4.21□□□□□ -1.74
CBX1P83916 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CBX1P83916 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
CBX1P83916 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CBX1P83916 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CBX1P83916 CCNB2P1-201ENST00000399411 1150 ntBASIC4.21□□□□□ -1.74
CBX1P83916 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.21□□□□□ -1.74
CBX1P83916 LINC01881-201ENST00000416103 412 ntBASIC4.21□□□□□ -1.74
CBX1P83916 AC092647.3-201ENST00000443044 633 ntBASIC4.21□□□□□ -1.74
CBX1P83916 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.21□□□□□ -1.74
CBX1P83916 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.21□□□□□ -1.74
CBX1P83916 UBA52P7-201ENST00000486088 380 ntBASIC4.21□□□□□ -1.74
CBX1P83916 OR9N1P-202ENST00000494289 481 ntBASIC4.21□□□□□ -1.74
CBX1P83916 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.21□□□□□ -1.74
CBX1P83916 AC010285.3-201ENST00000511668 676 ntBASIC4.21□□□□□ -1.74
CBX1P83916 RNA5SP92-201ENST00000516437 110 ntBASIC4.21□□□□□ -1.74
CBX1P83916 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.21□□□□□ -1.74
CBX1P83916 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.21□□□□□ -1.74
CBX1P83916 AC022832.1-201ENST00000530718 645 ntBASIC4.21□□□□□ -1.74
CBX1P83916 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.21□□□□□ -1.74
CBX1P83916 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.21□□□□□ -1.74
CBX1P83916 AC106785.3-201ENST00000564064 847 ntBASIC4.21□□□□□ -1.74
CBX1P83916 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.21□□□□□ -1.74
CBX1P83916 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.21□□□□□ -1.74
CBX1P83916 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.21□□□□□ -1.74
CBX1P83916 NF1P5-201ENST00000588287 448 ntBASIC4.21□□□□□ -1.74
CBX1P83916 ZNF92P3-201ENST00000596594 954 ntBASIC4.21□□□□□ -1.74
CBX1P83916 SUMO2P14-201ENST00000604488 293 ntBASIC4.21□□□□□ -1.74
CBX1P83916 AL592436.1-201ENST00000605135 558 ntBASIC4.21□□□□□ -1.74
CBX1P83916 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.21□□□□□ -1.74
CBX1P83916 AC022467.1-201ENST00000614738 749 ntBASIC4.21□□□□□ -1.74
CBX1P83916 AL591424.2-201ENST00000617023 128 ntBASIC4.21□□□□□ -1.74
CBX1P83916 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.21□□□□□ -1.74
CBX1P83916 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.21□□□□□ -1.74
CBX1P83916 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms