Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 OR10J6P-201ENST00000289731 930 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 RNU6-213P-201ENST00000384051 104 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 MIR320B1-201ENST00000390209 79 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCNA1P78396 GSTM3P2-201ENST00000412746 530 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.7□□□□□ -1.66
CCNA1P78396 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.7□□□□□ -1.66
CCNA1P78396 RPS4XP4-201ENST00000443195 763 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNA1P78396 HMGB3P21-201ENST00000452483 547 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 RPL36AP13-201ENST00000457490 317 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 ATP5G1P3-201ENST00000463301 410 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 AC010683.1-201ENST00000473673 378 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 RPL29P14-201ENST00000495837 428 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.7□□□□□ -1.66
CCNA1P78396 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.7□□□□□ -1.66
CCNA1P78396 PHBP17-201ENST00000528576 541 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNA1P78396 MIR5684-201ENST00000585074 65 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 AL137246.1-201ENST00000607072 977 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 AL353600.1-201ENST00000608148 251 ntBASIC4.7□□□□□ -1.66
CCNA1P78396 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.7□□□□□ -1.66
CCNA1P78396 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.7□□□□□ -1.66
CCNA1P78396 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCNA1P78396 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCNA1P78396 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.7□□□□□ -1.66
CCNA1P78396 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCNA1P78396 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCNA1P78396 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNA1P78396 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNA1P78396 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNA1P78396 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CCNA1P78396 AC096656.1-201ENST00000623826 1364 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 AC017002.4-201ENST00000604721 1525 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCNA1P78396 MIR708-201ENST00000390708 88 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 AC240504.1-201ENST00000395709 845 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 SNORA11.1-201ENST00000408133 129 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 SNORA57.3-201ENST00000411095 141 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 CRYBB2P1-203ENST00000415709 538 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNA1P78396 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.69□□□□□ -1.66
CCNA1P78396 NOTCH2P1-201ENST00000443481 624 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 RPS27AP15-201ENST00000447672 466 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 VN1R48P-201ENST00000448149 1036 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNA1P78396 RPL7P31-201ENST00000450192 724 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 ABCF2P2-201ENST00000450549 296 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 AC092691.2-201ENST00000461787 803 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 AC012158.1-204ENST00000483430 465 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNA1P78396 TRMT10BP1-201ENST00000519377 943 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.69□□□□□ -1.66
CCNA1P78396 CYCSP30-201ENST00000546447 172 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 AP005901.4-201ENST00000577336 569 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.69□□□□□ -1.66
CCNA1P78396 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNA1P78396 SNORA51-201ENST00000606420 132 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.69□□□□□ -1.66
CCNA1P78396 AL096803.3-201ENST00000609032 532 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 OR6R2P-201ENST00000609216 300 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCNA1P78396 EOGT-210ENST00000615922 1931 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNA1P78396 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNA1P78396 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNA1P78396 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNA1P78396 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNA1P78396 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.69□□□□□ -1.66
CCNA1P78396 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNA1P78396 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNA1P78396 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.69□□□□□ -1.66
CCNA1P78396 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNA1P78396 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCNA1P78396 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.68□□□□□ -1.66
CCNA1P78396 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNA1P78396 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNA1P78396 SNORD46.1-201ENST00000364139 104 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 MIR7-3-201ENST00000384898 110 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 RPS24P12-201ENST00000402084 394 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 AC069157.1-201ENST00000421749 137 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 AL138785.1-201ENST00000425821 331 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 NPM1P24-201ENST00000428039 894 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 AL121578.1-201ENST00000428051 892 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCNA1P78396 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.68□□□□□ -1.66
CCNA1P78396 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.68□□□□□ -1.66
CCNA1P78396 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.68□□□□□ -1.66
CCNA1P78396 RNU7-27P-201ENST00000459281 62 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 OR9M1P-201ENST00000459641 921 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CCNA1P78396 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CCNA1P78396 RPS4XP15-201ENST00000489210 795 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.68□□□□□ -1.66
CCNA1P78396 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.68□□□□□ -1.66
CCNA1P78396 AC063950.1-201ENST00000552036 308 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 AC025627.2-201ENST00000576220 160 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 AC008759.1-201ENST00000589783 983 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 MIR6868-201ENST00000611215 58 ntBASIC4.68□□□□□ -1.66
CCNA1P78396 AC244100.1-202ENST00000621554 382 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms