Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 AC093752.1-206ENST00000511823 336 ntBASIC3.79□□□□□ -1.8
LMO4P61968 Y_RNA.655-201ENST00000515919 96 ntBASIC3.79□□□□□ -1.8
LMO4P61968 SNORA31.13-201ENST00000516624 135 ntBASIC3.79□□□□□ -1.8
LMO4P61968 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 AP000916.1-201ENST00000533869 835 ntBASIC3.79□□□□□ -1.8
LMO4P61968 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.79□□□□□ -1.8
LMO4P61968 DUXAP6-201ENST00000553858 601 ntBASIC3.79□□□□□ -1.8
LMO4P61968 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.79□□□□□ -1.8
LMO4P61968 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.79□□□□□ -1.8
LMO4P61968 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 AC010503.3-201ENST00000594355 540 ntBASIC3.79□□□□□ -1.8
LMO4P61968 AC010487.1-201ENST00000594408 1172 ntBASIC3.79□□□□□ -1.8
LMO4P61968 PSMA6P4-201ENST00000603247 718 ntBASIC3.79□□□□□ -1.8
LMO4P61968 AC090425.2-201ENST00000608818 501 ntBASIC3.79□□□□□ -1.8
LMO4P61968 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.79□□□□□ -1.8
LMO4P61968 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.79□□□□□ -1.8
LMO4P61968 AC011944.2-201ENST00000624440 683 ntBASIC3.79□□□□□ -1.8
LMO4P61968 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 OR52H1-202ENST00000641796 1061 ntBASIC3.79□□□□□ -1.8
LMO4P61968 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
LMO4P61968 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.79□□□□□ -1.8
LMO4P61968 AC009229.4-201ENST00000623854 1947 ntBASIC3.79□□□□□ -1.8
LMO4P61968 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC3.79□□□□□ -1.8
LMO4P61968 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LMO4P61968 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
LMO4P61968 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LMO4P61968 CASC19-206ENST00000641028 1430 ntBASIC3.78□□□□□ -1.8
LMO4P61968 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 MTND4P5-201ENST00000435821 1374 ntBASIC3.78□□□□□ -1.8
LMO4P61968 DDX43P2-201ENST00000604753 1354 ntBASIC3.78□□□□□ -1.8
LMO4P61968 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LMO4P61968 AL450326.2-201ENST00000421913 1962 ntBASIC3.78□□□□□ -1.8
LMO4P61968 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LMO4P61968 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LMO4P61968 AL391684.1-202ENST00000641293 1636 ntBASIC3.78□□□□□ -1.8
LMO4P61968 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.78□□□□□ -1.8
LMO4P61968 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 AC010266.2-201ENST00000564741 3255 ntBASIC3.78□□□□□ -1.8
LMO4P61968 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LMO4P61968 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LMO4P61968 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 MIR142-201ENST00000384835 87 ntBASIC3.78□□□□□ -1.8
LMO4P61968 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
LMO4P61968 AL603865.2-201ENST00000401679 213 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AL356967.1-201ENST00000406305 431 ntBASIC3.78□□□□□ -1.8
LMO4P61968 MIR1302-8-201ENST00000408342 128 ntBASIC3.78□□□□□ -1.8
LMO4P61968 RNU4-22P-201ENST00000411058 166 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.78□□□□□ -1.8
LMO4P61968 AC010385.1-201ENST00000412374 256 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.78□□□□□ -1.8
LMO4P61968 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.78□□□□□ -1.8
LMO4P61968 HMGN2P27-201ENST00000427352 270 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AP001324.1-201ENST00000428553 399 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.78□□□□□ -1.8
LMO4P61968 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 AL353597.2-202ENST00000434901 373 ntBASIC3.78□□□□□ -1.8
LMO4P61968 FTH1P16-201ENST00000435241 552 ntBASIC3.78□□□□□ -1.8
LMO4P61968 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.78□□□□□ -1.8
LMO4P61968 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.78□□□□□ -1.8
LMO4P61968 AC104651.2-201ENST00000447549 528 ntBASIC3.78□□□□□ -1.8
LMO4P61968 RHEBP2-201ENST00000450289 600 ntBASIC3.78□□□□□ -1.8
LMO4P61968 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.78□□□□□ -1.8
LMO4P61968 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LMO4P61968 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LMO4P61968 PTGES3P5-201ENST00000455109 434 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AC005229.2-201ENST00000456995 399 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.78□□□□□ -1.8
LMO4P61968 RPS20P4-201ENST00000461659 355 ntBASIC3.78□□□□□ -1.8
LMO4P61968 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 PPIAP21-201ENST00000464473 501 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AL672167.3-201ENST00000465951 960 ntBASIC3.78□□□□□ -1.8
LMO4P61968 BET1P1-201ENST00000482276 359 ntBASIC3.78□□□□□ -1.8
LMO4P61968 RPL21P47-201ENST00000483696 477 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AC104687.1-201ENST00000485829 412 ntBASIC3.78□□□□□ -1.8
LMO4P61968 TPT1P3-201ENST00000492841 512 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AC111193.1-201ENST00000504097 155 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.78□□□□□ -1.8
LMO4P61968 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
LMO4P61968 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 RNA5SP464-201ENST00000516251 108 ntBASIC3.78□□□□□ -1.8
LMO4P61968 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.78□□□□□ -1.8
LMO4P61968 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.78□□□□□ -1.8
LMO4P61968 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LMO4P61968 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.78□□□□□ -1.8
LMO4P61968 CYB5AP5-201ENST00000549779 389 ntBASIC3.78□□□□□ -1.8
LMO4P61968 ATP5J2P6-201ENST00000565203 266 ntBASIC3.78□□□□□ -1.8
LMO4P61968 KPNA2P3-201ENST00000584190 848 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms