Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU6-156P-201ENST00000621869 107 ntBASIC5.6□□□□□ -1.51
RHBDL3P58872 AL359757.1-201ENST00000623176 255 ntBASIC5.6□□□□□ -1.51
RHBDL3P58872 AC092376.2-201ENST00000622621 4116 ntBASIC5.6□□□□□ -1.51
RHBDL3P58872 MAPK10-328ENST00000641553 4009 ntBASIC5.6□□□□□ -1.51
RHBDL3P58872 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.6□□□□□ -1.51
RHBDL3P58872 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RHBDL3P58872 AC090229.1-201ENST00000590983 1609 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDL3P58872 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RHBDL3P58872 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDL3P58872 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDL3P58872 OR14L1P-202ENST00000641545 3009 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDL3P58872 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
RHBDL3P58872 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.59□□□□□ -1.51
RHBDL3P58872 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDL3P58872 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.59□□□□□ -1.51
RHBDL3P58872 ZNF33CP-201ENST00000432492 2030 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 AC021146.4-201ENST00000309229 279 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDL3P58872 RNA5SP447-201ENST00000363749 119 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDL3P58872 MIR659-201ENST00000384963 97 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RHBDL3P58872 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDL3P58872 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDL3P58872 NPM1P33-201ENST00000438918 872 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDL3P58872 TPT1P12-201ENST00000448968 492 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 NPM1P13-201ENST00000452663 865 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDL3P58872 RNU6-202P-201ENST00000515998 96 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDL3P58872 OR4C2P-201ENST00000530855 1064 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 PTP4A1P6-201ENST00000531034 478 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDL3P58872 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDL3P58872 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.59□□□□□ -1.51
RHBDL3P58872 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDL3P58872 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDL3P58872 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RHBDL3P58872 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.59□□□□□ -1.51
RHBDL3P58872 AC233702.9-201ENST00000581528 203 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDL3P58872 AC011458.1-201ENST00000604034 617 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 AL390816.3-201ENST00000604527 1066 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 AL049536.1-201ENST00000625043 744 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 AC087821.2-201ENST00000637086 450 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 FAM157B-203ENST00000639350 358 ntBASIC5.59□□□□□ -1.51
RHBDL3P58872 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RHBDL3P58872 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RHBDL3P58872 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDL3P58872 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDL3P58872 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDL3P58872 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RHBDL3P58872 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDL3P58872 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDL3P58872 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
RHBDL3P58872 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RHBDL3P58872 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.59□□□□□ -1.52
RHBDL3P58872 RAD17P1-201ENST00000418130 2042 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.58□□□□□ -1.52
RHBDL3P58872 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDL3P58872 MTND4P8-201ENST00000514997 1362 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDL3P58872 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDL3P58872 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDL3P58872 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDL3P58872 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RHBDL3P58872 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDL3P58872 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.58□□□□□ -1.52
RHBDL3P58872 RNU6-224P-201ENST00000384055 107 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 SNORA5.1-201ENST00000384275 131 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 AC027644.1-201ENST00000419595 298 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 GTF2IP2-201ENST00000424290 697 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDL3P58872 BTF3P6-201ENST00000448054 499 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 Z99714.1-201ENST00000450463 807 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDL3P58872 snoU13.7-201ENST00000459220 104 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.58□□□□□ -1.52
RHBDL3P58872 AP000893.1-201ENST00000474462 794 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDL3P58872 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDL3P58872 SNX5P1-201ENST00000505757 1041 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 PRELID3BP5-201ENST00000508612 460 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 KRT19P6-201ENST00000510983 209 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.58□□□□□ -1.52
RHBDL3P58872 OR8G5-201ENST00000524943 1041 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDL3P58872 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDL3P58872 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.58□□□□□ -1.52
RHBDL3P58872 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.58□□□□□ -1.52
RHBDL3P58872 AC044913.1-201ENST00000557200 430 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
RHBDL3P58872 AL583856.2-201ENST00000606298 543 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 AL121652.1-201ENST00000608851 448 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 AC016597.2-201ENST00000613256 341 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 AC104985.3-201ENST00000623479 597 ntBASIC5.58□□□□□ -1.52
RHBDL3P58872 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms