Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLDN6P56747 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN6P56747 AC009303.3-201ENST00000591103 736 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 AC005255.1-201ENST00000593748 216 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 AC005034.4-201ENST00000603612 899 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN6P56747 AC090953.1-201ENST00000604305 1092 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 AL592436.1-201ENST00000605135 558 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 SNORA51-201ENST00000606420 132 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN6P56747 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLDN6P56747 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.97□□□□□ -1.77
CLDN6P56747 AC009093.8-201ENST00000641769 292 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN6P56747 AC024560.2-201ENST00000507981 1497 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN6P56747 OR51H2P-202ENST00000641424 3046 ntBASIC3.97□□□□□ -1.77
CLDN6P56747 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.96□□□□□ -1.77
CLDN6P56747 LINC01109-201ENST00000603837 3081 ntBASIC3.96□□□□□ -1.77
CLDN6P56747 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN6P56747 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN6P56747 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN6P56747 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN6P56747 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN6P56747 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN6P56747 RNA5SP119-201ENST00000362715 117 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 RNA5SP307-201ENST00000362863 116 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 SNORA9-201ENST00000384215 133 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 MIR7-3-201ENST00000384898 110 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN6P56747 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN6P56747 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN6P56747 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN6P56747 AC006011.1-201ENST00000442758 349 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 RPS27AP15-201ENST00000447672 466 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN6P56747 OR7L1P-201ENST00000456181 380 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN6P56747 RNU6-1218P-201ENST00000458990 108 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 AC104629.2-201ENST00000468627 598 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN6P56747 AC090013.1-201ENST00000485147 480 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
CLDN6P56747 AC010627.1-201ENST00000503819 1294 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN6P56747 RNA5SP360-201ENST00000516555 118 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN6P56747 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.96□□□□□ -1.78
CLDN6P56747 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN6P56747 AC100770.1-201ENST00000532310 322 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 AC006064.5-201ENST00000541782 248 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 GTF2IP22-201ENST00000554443 182 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 AC008759.1-201ENST00000589783 983 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN6P56747 PSMA6P4-201ENST00000603247 718 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 AC244517.3-201ENST00000616254 1235 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 AC020978.9-201ENST00000624380 1141 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN6P56747 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CLDN6P56747 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CLDN6P56747 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN6P56747 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN6P56747 SPATA2P1-201ENST00000431223 2055 ntBASIC3.96□□□□□ -1.78
CLDN6P56747 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN6P56747 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CLDN6P56747 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN6P56747 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN6P56747 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.95□□□□□ -1.78
CLDN6P56747 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN6P56747 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN6P56747 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CLDN6P56747 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CLDN6P56747 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN6P56747 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN6P56747 U8.11-201ENST00000384699 133 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 U8.12-201ENST00000384701 133 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 MIR92A2-201ENST00000385299 75 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN6P56747 MTCO1P45-201ENST00000431457 267 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN6P56747 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.95□□□□□ -1.78
CLDN6P56747 IFNWP4-201ENST00000453148 294 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 U8.18-201ENST00000459285 133 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 OR9M1P-201ENST00000459641 921 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 RPL5P13-201ENST00000462840 709 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN6P56747 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.95□□□□□ -1.78
CLDN6P56747 KRT19P6-201ENST00000510983 209 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.95□□□□□ -1.78
CLDN6P56747 AC093853.1-201ENST00000515689 483 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 MTCYBP19-201ENST00000517463 1124 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 SOD1P3-201ENST00000518682 454 ntBASIC3.95□□□□□ -1.78
CLDN6P56747 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN6P56747 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.95□□□□□ -1.78
CLDN6P56747 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN6P56747 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
CLDN6P56747 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.95□□□□□ -1.78
CLDN6P56747 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN6P56747 MIR6868-201ENST00000611215 58 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms