Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC008536.1-201ENST00000602872 669 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AL161729.3-201ENST00000603533 673 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AL049844.2-201ENST00000604280 628 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC090246.1-201ENST00000616499 426 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC009318.3-201ENST00000616916 503 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.99□□□□□ -1.77
PKNOX1P55347 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.99□□□□□ -1.77
PKNOX1P55347 Z82217.1-201ENST00000625157 8149 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC096656.1-201ENST00000623826 1364 ntBASIC3.99□□□□□ -1.77
PKNOX1P55347 AC012618.3-205ENST00000637896 1496 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.98□□□□□ -1.77
PKNOX1P55347 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
PKNOX1P55347 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PKNOX1P55347 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
PKNOX1P55347 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PKNOX1P55347 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PKNOX1P55347 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PKNOX1P55347 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PKNOX1P55347 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.98□□□□□ -1.77
PKNOX1P55347 AL031985.3-201ENST00000565390 2449 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PKNOX1P55347 MIR192-201ENST00000384915 110 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 FAR2P2-201ENST00000413041 594 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.98□□□□□ -1.77
PKNOX1P55347 CYP4F29P-201ENST00000420685 446 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 AC073069.1-201ENST00000428657 441 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 RPS3AP54-201ENST00000435535 734 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 XKRY2-201ENST00000442362 1093 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 AC006011.1-201ENST00000442758 349 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
PKNOX1P55347 RNU7-27P-201ENST00000459281 62 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 RPL7P1-201ENST00000468161 747 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 RPL7P9-201ENST00000468715 747 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.98□□□□□ -1.77
PKNOX1P55347 AC107398.1-201ENST00000486904 505 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 AC146944.2-203ENST00000502493 354 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.98□□□□□ -1.77
PKNOX1P55347 AC139495.1-202ENST00000513164 354 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 AC010342.1-201ENST00000514047 877 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.98□□□□□ -1.77
PKNOX1P55347 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.98□□□□□ -1.77
PKNOX1P55347 MTND1P6-201ENST00000523621 946 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 OR5AN2P-201ENST00000534535 896 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.98□□□□□ -1.77
PKNOX1P55347 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.98□□□□□ -1.77
PKNOX1P55347 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.98□□□□□ -1.77
PKNOX1P55347 TVP23BP1-201ENST00000557500 617 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 AC051619.2-201ENST00000559063 397 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.98□□□□□ -1.77
PKNOX1P55347 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.98□□□□□ -1.77
PKNOX1P55347 AP003392.5-201ENST00000607857 415 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 AP000255.1-201ENST00000610276 676 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 MIR486-1-201ENST00000612171 68 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.98□□□□□ -1.77
PKNOX1P55347 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.98□□□□□ -1.77
PKNOX1P55347 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PKNOX1P55347 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PKNOX1P55347 AC116667.1-201ENST00000604855 2072 ntBASIC3.98□□□□□ -1.77
PKNOX1P55347 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PKNOX1P55347 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PKNOX1P55347 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PKNOX1P55347 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.97□□□□□ -1.77
PKNOX1P55347 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PKNOX1P55347 BDP1P-201ENST00000582658 1990 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
PKNOX1P55347 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PKNOX1P55347 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PKNOX1P55347 OR4K17-201ENST00000315543 1032 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PKNOX1P55347 RNU1-132P-201ENST00000364300 164 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PKNOX1P55347 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PKNOX1P55347 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.97□□□□□ -1.77
PKNOX1P55347 RN7SKP56-201ENST00000410513 331 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 AC011933.1-201ENST00000413334 321 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.97□□□□□ -1.77
PKNOX1P55347 RSL24D1P8-201ENST00000434442 492 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.97□□□□□ -1.77
PKNOX1P55347 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.97□□□□□ -1.77
PKNOX1P55347 AL645939.1-201ENST00000453429 797 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.97□□□□□ -1.77
PKNOX1P55347 AC116533.1-201ENST00000459748 321 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.97□□□□□ -1.77
PKNOX1P55347 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.97□□□□□ -1.77
PKNOX1P55347 RN7SL205P-201ENST00000490174 284 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
PKNOX1P55347 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.97□□□□□ -1.77
PKNOX1P55347 MIR2114-201ENST00000516645 80 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.97□□□□□ -1.77
PKNOX1P55347 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.97□□□□□ -1.77
PKNOX1P55347 AC007424.1-203ENST00000554613 687 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 GNRHR2P1-201ENST00000555315 631 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.97□□□□□ -1.77
PKNOX1P55347 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.97□□□□□ -1.77
PKNOX1P55347 AC114878.2-201ENST00000604863 1251 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 AL451044.1-201ENST00000604867 238 ntBASIC3.97□□□□□ -1.77
PKNOX1P55347 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PKNOX1P55347 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PKNOX1P55347 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
PKNOX1P55347 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms