Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RPS29P33-201ENST00000456717 146 ntBASIC4.23□□□□□ -1.73
CDH11P55287 SNORD11.1-201ENST00000459482 85 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC005912.1-201ENST00000495392 255 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AL035404.1-201ENST00000497982 568 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC091860.1-201ENST00000505723 432 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.23□□□□□ -1.73
CDH11P55287 RNU6-347P-201ENST00000516658 105 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH11P55287 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.23□□□□□ -1.73
CDH11P55287 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH11P55287 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.23□□□□□ -1.73
CDH11P55287 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH11P55287 MTCO1P40-201ENST00000574371 625 ntBASIC4.23□□□□□ -1.73
CDH11P55287 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 HMGB2P1-201ENST00000591146 634 ntBASIC4.23□□□□□ -1.73
CDH11P55287 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH11P55287 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH11P55287 AL391358.1-201ENST00000605342 190 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC006946.3-201ENST00000609791 756 ntBASIC4.23□□□□□ -1.73
CDH11P55287 PART1_2.1-201ENST00000612397 250 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC009237.17-201ENST00000618111 748 ntBASIC4.23□□□□□ -1.73
CDH11P55287 VN1R7P-201ENST00000619242 903 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AL121895.2-201ENST00000619558 447 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AL356863.1-201ENST00000623378 1080 ntBASIC4.23□□□□□ -1.73
CDH11P55287 AC055839.1-201ENST00000634467 498 ntBASIC4.23□□□□□ -1.73
CDH11P55287 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 AL592182.3-201ENST00000642132 3304 ntBASIC4.23□□□□□ -1.73
CDH11P55287 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CDH11P55287 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH11P55287 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH11P55287 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH11P55287 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CDH11P55287 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH11P55287 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CDH11P55287 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 ANKRD36P1-201ENST00000344424 659 ntBASIC4.22□□□□□ -1.73
CDH11P55287 RNU1-87P-201ENST00000363727 170 ntBASIC4.22□□□□□ -1.73
CDH11P55287 RNU4-51P-201ENST00000364206 140 ntBASIC4.22□□□□□ -1.73
CDH11P55287 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH11P55287 MIR298-201ENST00000401212 88 ntBASIC4.22□□□□□ -1.73
CDH11P55287 RN7SKP100-201ENST00000411258 284 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 SSR1P2-201ENST00000415208 787 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC004074.1-201ENST00000421810 1063 ntBASIC4.22□□□□□ -1.73
CDH11P55287 RPL21P43-201ENST00000425440 472 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC092648.1-201ENST00000425870 423 ntBASIC4.22□□□□□ -1.73
CDH11P55287 C1DP1-201ENST00000426049 402 ntBASIC4.22□□□□□ -1.73
CDH11P55287 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH11P55287 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH11P55287 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH11P55287 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.22□□□□□ -1.73
CDH11P55287 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH11P55287 AL929288.2-201ENST00000446368 407 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC022431.1-201ENST00000450941 438 ntBASIC4.22□□□□□ -1.73
CDH11P55287 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH11P55287 DNAJC19P8-201ENST00000452887 259 ntBASIC4.22□□□□□ -1.73
CDH11P55287 NDUFA12P1-201ENST00000455914 406 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH11P55287 RPL7P32-201ENST00000457119 744 ntBASIC4.22□□□□□ -1.73
CDH11P55287 RPL23AP56-201ENST00000460778 453 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC020898.1-201ENST00000474167 787 ntBASIC4.22□□□□□ -1.73
CDH11P55287 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 AC012158.1-204ENST00000483430 465 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC025164.1-201ENST00000496249 478 ntBASIC4.22□□□□□ -1.73
CDH11P55287 RPL21P131-201ENST00000497298 483 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH11P55287 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 HPRT1P2-201ENST00000505250 544 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH11P55287 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH11P55287 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 AC092593.2-201ENST00000513866 913 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.22□□□□□ -1.73
CDH11P55287 IGKV1-32-201ENST00000519290 311 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH11P55287 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH11P55287 AP001880.2-201ENST00000538233 448 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH11P55287 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH11P55287 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 RN7SL802P-201ENST00000577858 299 ntBASIC4.22□□□□□ -1.73
CDH11P55287 RN7SL176P-201ENST00000580352 264 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC234771.5-201ENST00000600161 514 ntBASIC4.22□□□□□ -1.73
CDH11P55287 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH11P55287 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH11P55287 BNIP3P4-201ENST00000604946 565 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC008966.2-201ENST00000606157 453 ntBASIC4.22□□□□□ -1.73
CDH11P55287 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.22□□□□□ -1.73
CDH11P55287 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms