Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL133244.1-201ENST00000456007 258 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 AC089999.1-201ENST00000460336 374 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 UBE2CP3-201ENST00000502715 450 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCS2P54868 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCS2P54868 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCS2P54868 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGCS2P54868 SOD1P3-201ENST00000518682 454 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 DUXAP2-201ENST00000519198 589 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 AC104997.1-201ENST00000519761 717 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 AC087369.1-201ENST00000520775 996 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGCS2P54868 AC100770.1-201ENST00000532310 322 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCS2P54868 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGCS2P54868 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCS2P54868 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
HMGCS2P54868 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCS2P54868 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCS2P54868 AC007179.3-201ENST00000604976 235 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 BNIP3P41-202ENST00000616656 861 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 AL357559.1-201ENST00000622228 274 ntBASIC4.56□□□□□ -1.68
HMGCS2P54868 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCS2P54868 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCS2P54868 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCS2P54868 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCS2P54868 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCS2P54868 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCS2P54868 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCS2P54868 MARK2P15-201ENST00000432204 2186 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCS2P54868 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.55□□□□□ -1.68
HMGCS2P54868 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCS2P54868 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCS2P54868 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCS2P54868 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCS2P54868 RPL5P19-201ENST00000404228 893 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 SETP15-201ENST00000412724 337 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 AL139247.1-201ENST00000422768 325 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 MTND4LP13-201ENST00000425022 298 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.55□□□□□ -1.68
HMGCS2P54868 AL591419.1-201ENST00000427423 339 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 AC110768.1-201ENST00000509222 400 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 SNORA70.17-201ENST00000516449 133 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCS2P54868 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.55□□□□□ -1.68
HMGCS2P54868 NPM1P47-201ENST00000560843 856 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.55□□□□□ -1.68
HMGCS2P54868 AP005262.1-201ENST00000582646 997 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.55□□□□□ -1.68
HMGCS2P54868 AL137072.1-201ENST00000603444 466 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 AL049634.3-201ENST00000604968 457 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 AC007620.3-201ENST00000608131 497 ntBASIC4.55□□□□□ -1.68
HMGCS2P54868 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCS2P54868 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCS2P54868 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HMGCS2P54868 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCS2P54868 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGCS2P54868 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCS2P54868 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCS2P54868 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HMGCS2P54868 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HMGCS2P54868 ATP5F1P4-201ENST00000397288 746 ntBASIC4.54□□□□□ -1.68
HMGCS2P54868 ZNF602P-201ENST00000405929 924 ntBASIC4.54□□□□□ -1.68
HMGCS2P54868 USP9YP19-201ENST00000412165 485 ntBASIC4.54□□□□□ -1.68
HMGCS2P54868 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.54□□□□□ -1.68
HMGCS2P54868 AC022431.1-201ENST00000450941 438 ntBASIC4.54□□□□□ -1.68
HMGCS2P54868 RPL21P11-201ENST00000461458 483 ntBASIC4.54□□□□□ -1.68
HMGCS2P54868 AL133162.1-201ENST00000463228 453 ntBASIC4.54□□□□□ -1.68
HMGCS2P54868 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGCS2P54868 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGCS2P54868 IGKV2D-19-201ENST00000523346 262 ntBASIC4.54□□□□□ -1.68
HMGCS2P54868 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCS2P54868 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.54□□□□□ -1.68
HMGCS2P54868 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGCS2P54868 AC022968.1-201ENST00000567372 442 ntBASIC4.54□□□□□ -1.68
HMGCS2P54868 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.54□□□□□ -1.68
HMGCS2P54868 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGCS2P54868 AC023813.4-201ENST00000607580 580 ntBASIC4.54□□□□□ -1.68
HMGCS2P54868 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.54□□□□□ -1.68
HMGCS2P54868 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HMGCS2P54868 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCS2P54868 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.54□□□□□ -1.68
HMGCS2P54868 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCS2P54868 CASC19-284ENST00000642142 1868 ntBASIC4.54□□□□□ -1.68
HMGCS2P54868 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.54□□□□□ -1.68
HMGCS2P54868 HSPA8P17-201ENST00000427029 1382 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS2P54868 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGCS2P54868 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGCS2P54868 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS2P54868 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS2P54868 AC007066.1-201ENST00000392902 381 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 AL139039.2-201ENST00000407436 479 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 RPL7AP73-201ENST00000413490 353 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 AL035423.1-201ENST00000420331 213 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 AC004448.2-201ENST00000422360 586 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 PDSS1P1-201ENST00000422953 1114 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCS2P54868 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms