Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLTCL1P53675 HMGB3P20-201ENST00000417997 600 ntBASIC5.29□□□□□ -1.56
CLTCL1P53675 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.29□□□□□ -1.56
CLTCL1P53675 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.29□□□□□ -1.56
CLTCL1P53675 SNORA59A-201ENST00000459326 152 ntBASIC5.29□□□□□ -1.56
CLTCL1P53675 AP000942.1-201ENST00000463969 747 ntBASIC5.29□□□□□ -1.56
CLTCL1P53675 AP000563.1-201ENST00000490865 758 ntBASIC5.29□□□□□ -1.56
CLTCL1P53675 UBA52P3-201ENST00000491303 382 ntBASIC5.29□□□□□ -1.56
CLTCL1P53675 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.29□□□□□ -1.56
CLTCL1P53675 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.29□□□□□ -1.56
CLTCL1P53675 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLTCL1P53675 AC023161.2-201ENST00000551218 780 ntBASIC5.29□□□□□ -1.56
CLTCL1P53675 TRAV15-201ENST00000556680 249 ntBASIC5.29□□□□□ -1.56
CLTCL1P53675 AL157762.1-201ENST00000619612 415 ntBASIC5.29□□□□□ -1.56
CLTCL1P53675 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
CLTCL1P53675 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLTCL1P53675 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLTCL1P53675 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLTCL1P53675 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLTCL1P53675 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLTCL1P53675 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLTCL1P53675 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLTCL1P53675 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLTCL1P53675 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLTCL1P53675 AC010469.1-201ENST00000463864 576 ntBASIC5.28□□□□□ -1.56
CLTCL1P53675 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.28□□□□□ -1.56
CLTCL1P53675 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.28□□□□□ -1.56
CLTCL1P53675 DPRXP4-201ENST00000578053 568 ntBASIC5.28□□□□□ -1.56
CLTCL1P53675 MIR5195-201ENST00000583555 115 ntBASIC5.28□□□□□ -1.56
CLTCL1P53675 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.28□□□□□ -1.56
CLTCL1P53675 AF131215.7-201ENST00000602443 707 ntBASIC5.28□□□□□ -1.56
CLTCL1P53675 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.28□□□□□ -1.56
CLTCL1P53675 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.28□□□□□ -1.56
CLTCL1P53675 OR5AC4P-202ENST00000642086 985 ntBASIC5.28□□□□□ -1.56
CLTCL1P53675 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLTCL1P53675 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLTCL1P53675 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.28□□□□□ -1.56
CLTCL1P53675 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
CLTCL1P53675 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.27□□□□□ -1.57
CLTCL1P53675 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CLTCL1P53675 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLTCL1P53675 AC093849.1-201ENST00000563631 2209 ntBASIC5.27□□□□□ -1.57
CLTCL1P53675 AC245054.1-201ENST00000420944 258 ntBASIC5.27□□□□□ -1.57
CLTCL1P53675 AC017083.1-201ENST00000428093 483 ntBASIC5.27□□□□□ -1.57
CLTCL1P53675 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.27□□□□□ -1.57
CLTCL1P53675 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.27□□□□□ -1.57
CLTCL1P53675 RBMY2UP-201ENST00000453474 324 ntBASIC5.27□□□□□ -1.57
CLTCL1P53675 RN7SL601P-201ENST00000471221 293 ntBASIC5.27□□□□□ -1.57
CLTCL1P53675 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.27□□□□□ -1.57
CLTCL1P53675 AC025445.1-201ENST00000502728 300 ntBASIC5.27□□□□□ -1.57
CLTCL1P53675 HMGB1P19-201ENST00000517578 577 ntBASIC5.27□□□□□ -1.57
CLTCL1P53675 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLTCL1P53675 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.27□□□□□ -1.57
CLTCL1P53675 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.27□□□□□ -1.57
CLTCL1P53675 MIR8058-201ENST00000615737 89 ntBASIC5.27□□□□□ -1.57
CLTCL1P53675 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLTCL1P53675 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
CLTCL1P53675 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLTCL1P53675 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.27□□□□□ -1.57
CLTCL1P53675 LINC01109-201ENST00000603837 3081 ntBASIC5.27□□□□□ -1.57
CLTCL1P53675 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.27□□□□□ -1.57
CLTCL1P53675 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLTCL1P53675 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CLTCL1P53675 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.27□□□□□ -1.57
CLTCL1P53675 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.27□□□□□ -1.57
CLTCL1P53675 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLTCL1P53675 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLTCL1P53675 AC017079.2-201ENST00000416102 485 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.26□□□□□ -1.57
CLTCL1P53675 OSTCP5-201ENST00000425293 453 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 DPY19L1P2-201ENST00000426647 915 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 SNORD105B-201ENST00000458770 79 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.26□□□□□ -1.57
CLTCL1P53675 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.26□□□□□ -1.57
CLTCL1P53675 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.26□□□□□ -1.57
CLTCL1P53675 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.26□□□□□ -1.57
CLTCL1P53675 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.26□□□□□ -1.57
CLTCL1P53675 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.26□□□□□ -1.57
CLTCL1P53675 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.26□□□□□ -1.57
CLTCL1P53675 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.26□□□□□ -1.57
CLTCL1P53675 AL365440.1-201ENST00000436135 2167 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLTCL1P53675 OR52E6-202ENST00000379946 954 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 MIR93-201ENST00000385024 80 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 Z92545.1-201ENST00000411782 234 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 AC096644.3-201ENST00000416788 338 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 AC073063.1-201ENST00000434352 607 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.26□□□□□ -1.57
CLTCL1P53675 TMX2P1-201ENST00000436507 708 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 RPL5P16-201ENST00000471467 790 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.26□□□□□ -1.57
CLTCL1P53675 AL442128.2-201ENST00000620246 1824 ntBASIC5.26□□□□□ -1.57
CLTCL1P53675 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLTCL1P53675 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLTCL1P53675 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.25□□□□□ -1.57
CLTCL1P53675 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLTCL1P53675 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLTCL1P53675 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLTCL1P53675 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms