Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP9P49458 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.56□□□□□ -1.84
SRP9P49458 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP9P49458 VN1R84P-201ENST00000593697 235 ntBASIC3.56□□□□□ -1.84
SRP9P49458 AC104662.1-201ENST00000604448 511 ntBASIC3.56□□□□□ -1.84
SRP9P49458 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.56□□□□□ -1.84
SRP9P49458 AL391261.4-201ENST00000616012 481 ntBASIC3.56□□□□□ -1.84
SRP9P49458 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP9P49458 MIR6758-201ENST00000620653 63 ntBASIC3.56□□□□□ -1.84
SRP9P49458 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP9P49458 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SRP9P49458 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
SRP9P49458 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.56□□□□□ -1.84
SRP9P49458 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SRP9P49458 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SRP9P49458 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SRP9P49458 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.56□□□□□ -1.84
SRP9P49458 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP9P49458 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SRP9P49458 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.55□□□□□ -1.84
SRP9P49458 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SRP9P49458 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SRP9P49458 RNU1-18P-201ENST00000363062 164 ntBASIC3.55□□□□□ -1.84
SRP9P49458 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SRP9P49458 RPS26P8-201ENST00000393490 348 ntBASIC3.55□□□□□ -1.84
SRP9P49458 AL161909.1-201ENST00000397390 712 ntBASIC3.55□□□□□ -1.84
SRP9P49458 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.55□□□□□ -1.84
SRP9P49458 AL590806.1-201ENST00000415818 853 ntBASIC3.55□□□□□ -1.84
SRP9P49458 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.55□□□□□ -1.84
SRP9P49458 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.55□□□□□ -1.84
SRP9P49458 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SRP9P49458 AC092832.1-201ENST00000422934 400 ntBASIC3.55□□□□□ -1.84
SRP9P49458 ATP5HP2-201ENST00000433885 485 ntBASIC3.55□□□□□ -1.84
SRP9P49458 AC096638.2-201ENST00000434965 711 ntBASIC3.55□□□□□ -1.84
SRP9P49458 RPS26P40-201ENST00000435209 294 ntBASIC3.55□□□□□ -1.84
SRP9P49458 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP9P49458 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP9P49458 RPL36AP13-201ENST00000457490 317 ntBASIC3.55□□□□□ -1.84
SRP9P49458 RNA5SP246-201ENST00000458909 119 ntBASIC3.55□□□□□ -1.84
SRP9P49458 RNU7-170P-201ENST00000459303 61 ntBASIC3.55□□□□□ -1.84
SRP9P49458 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP9P49458 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
SRP9P49458 AF213884.1-201ENST00000488102 463 ntBASIC3.55□□□□□ -1.84
SRP9P49458 RPS27AP13-201ENST00000498403 237 ntBASIC3.55□□□□□ -1.84
SRP9P49458 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP9P49458 TRAV31-201ENST00000502780 342 ntBASIC3.55□□□□□ -1.84
SRP9P49458 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SRP9P49458 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP9P49458 AC026726.1-201ENST00000512859 601 ntBASIC3.55□□□□□ -1.84
SRP9P49458 RN7SKP122-201ENST00000515923 296 ntBASIC3.55□□□□□ -1.84
SRP9P49458 MRPL49P2-201ENST00000521066 465 ntBASIC3.55□□□□□ -1.84
SRP9P49458 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.55□□□□□ -1.84
SRP9P49458 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP9P49458 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP9P49458 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP9P49458 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.55□□□□□ -1.84
SRP9P49458 MRPS35P3-201ENST00000603189 709 ntBASIC3.55□□□□□ -1.84
SRP9P49458 AC009318.3-201ENST00000616916 503 ntBASIC3.55□□□□□ -1.84
SRP9P49458 AL445567.2-201ENST00000618935 498 ntBASIC3.55□□□□□ -1.84
SRP9P49458 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SRP9P49458 AC020978.9-201ENST00000624380 1141 ntBASIC3.55□□□□□ -1.84
SRP9P49458 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SRP9P49458 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SRP9P49458 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.55□□□□□ -1.84
SRP9P49458 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.55□□□□□ -1.84
SRP9P49458 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SRP9P49458 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SRP9P49458 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SRP9P49458 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SRP9P49458 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.54□□□□□ -1.84
SRP9P49458 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
SRP9P49458 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SRP9P49458 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SRP9P49458 OR11H4-201ENST00000315409 1082 ntBASIC3.54□□□□□ -1.84
SRP9P49458 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SRP9P49458 MT-RNR1-201ENST00000389680 954 ntBASIC3.54□□□□□ -1.84
SRP9P49458 HMGN2P8-201ENST00000391458 268 ntBASIC3.54□□□□□ -1.84
SRP9P49458 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SRP9P49458 AC073464.3-201ENST00000422564 712 ntBASIC3.54□□□□□ -1.84
SRP9P49458 AC073069.1-201ENST00000428657 441 ntBASIC3.54□□□□□ -1.84
SRP9P49458 NPM1P34-201ENST00000428821 893 ntBASIC3.54□□□□□ -1.84
SRP9P49458 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SRP9P49458 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.54□□□□□ -1.84
SRP9P49458 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP9P49458 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.54□□□□□ -1.84
SRP9P49458 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP9P49458 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP9P49458 CFTRP1-201ENST00000456646 183 ntBASIC3.54□□□□□ -1.84
SRP9P49458 AC018635.1-201ENST00000468292 1030 ntBASIC3.54□□□□□ -1.84
SRP9P49458 RN7SL385P-201ENST00000468873 276 ntBASIC3.54□□□□□ -1.84
SRP9P49458 AC011037.1-201ENST00000483964 558 ntBASIC3.54□□□□□ -1.84
SRP9P49458 RPL29P14-201ENST00000495837 428 ntBASIC3.54□□□□□ -1.84
SRP9P49458 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP9P49458 AC005798.1-201ENST00000513715 387 ntBASIC3.54□□□□□ -1.84
SRP9P49458 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP9P49458 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.54□□□□□ -1.84
SRP9P49458 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.54□□□□□ -1.84
SRP9P49458 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SRP9P49458 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SRP9P49458 PARP1P2-201ENST00000556806 195 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms