Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL445567.2-201ENST00000618935 498 ntBASIC4.15□□□□□ -1.75
SLC1A1P43005 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC1A1P43005 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC1A1P43005 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC1A1P43005 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SLC1A1P43005 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SLC1A1P43005 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 AC010329.2-201ENST00000595195 2737 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.14□□□□□ -1.75
SLC1A1P43005 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC1A1P43005 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC1A1P43005 RPA2P2-201ENST00000419698 796 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 HMGB1P32-201ENST00000425971 565 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 RPL7P4-203ENST00000430239 730 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 EXTL2P1-201ENST00000446218 416 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 EIF4A1P11-201ENST00000451239 222 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 S100A11P1-201ENST00000477525 312 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 AC092045.1-201ENST00000495716 1231 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 BTF3L4P4-201ENST00000506381 449 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 AC067904.2-201ENST00000517322 1283 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC1A1P43005 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC1A1P43005 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 EIF1AXP2-201ENST00000555940 413 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 AC018552.3-201ENST00000567416 561 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 AC009101.1-201ENST00000568135 242 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 RN7SL600P-201ENST00000581811 299 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 AL133247.2-201ENST00000603236 482 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC1A1P43005 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC1A1P43005 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC1A1P43005 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC1A1P43005 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC1A1P43005 AL451142.2-201ENST00000429076 2090 ntBASIC4.14□□□□□ -1.75
SLC1A1P43005 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC1A1P43005 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SLC1A1P43005 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC1A1P43005 OR6C69P-201ENST00000394268 893 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 HLFP1-201ENST00000402375 499 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 RPL37P18-201ENST00000411602 243 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 AC016769.2-201ENST00000414815 475 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC1A1P43005 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC1A1P43005 AC115285.1-201ENST00000424879 736 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC1A1P43005 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC1A1P43005 AC092809.1-201ENST00000441469 474 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 VN1R48P-201ENST00000448149 1036 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 AL132838.2-201ENST00000492041 314 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC1A1P43005 RNA5SP143-201ENST00000516936 115 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 IGKV2D-23-201ENST00000518179 286 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC1A1P43005 AC091515.1-201ENST00000548110 679 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SLC1A1P43005 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC1A1P43005 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC1A1P43005 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC1A1P43005 AC008745.1-201ENST00000604064 271 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC1A1P43005 AL391597.1-201ENST00000618707 694 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 RPL23AP61-201ENST00000623642 466 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC1A1P43005 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC1A1P43005 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC1A1P43005 ATE1-AS1-202ENST00000636460 506 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 SPATA2P1-201ENST00000431223 2055 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 NCAPGP1-201ENST00000505112 1814 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC1A1P43005 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC1A1P43005 CCT8P1-201ENST00000413611 1657 ntBASIC4.13□□□□□ -1.75
SLC1A1P43005 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC1A1P43005 AC073429.2-201ENST00000569694 1444 ntBASIC4.12□□□□□ -1.75
SLC1A1P43005 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC1A1P43005 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC1A1P43005 FAM35DP-201ENST00000323387 2712 ntBASIC4.12□□□□□ -1.75
SLC1A1P43005 LINC00561-201ENST00000565815 2738 ntBASIC4.12□□□□□ -1.75
SLC1A1P43005 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC1A1P43005 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SLC1A1P43005 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC1A1P43005 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC1A1P43005 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC1A1P43005 HMGN2P8-201ENST00000391458 268 ntBASIC4.12□□□□□ -1.75
SLC1A1P43005 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC1A1P43005 OR5AW1P-201ENST00000426334 1006 ntBASIC4.12□□□□□ -1.75
SLC1A1P43005 AL158073.1-201ENST00000426848 1104 ntBASIC4.12□□□□□ -1.75
SLC1A1P43005 NPM1P34-201ENST00000428821 893 ntBASIC4.12□□□□□ -1.75
SLC1A1P43005 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC1A1P43005 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC1A1P43005 RPS20P1-201ENST00000434853 354 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms