Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.47□□□□□ -1.69
HNF4AP41235 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HNF4AP41235 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HNF4AP41235 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
HNF4AP41235 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.47□□□□□ -1.69
HNF4AP41235 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HNF4AP41235 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 AC018529.3-201ENST00000624212 2254 ntBASIC4.47□□□□□ -1.69
HNF4AP41235 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HNF4AP41235 DCAF13P1-201ENST00000495256 1330 ntBASIC4.46□□□□□ -1.69
HNF4AP41235 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
HNF4AP41235 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HNF4AP41235 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HNF4AP41235 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HNF4AP41235 AC125257.1-201ENST00000560400 2930 ntBASIC4.46□□□□□ -1.69
HNF4AP41235 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HNF4AP41235 AC006971.1-201ENST00000407916 4486 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HNF4AP41235 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.46□□□□□ -1.7
HNF4AP41235 MIR620-201ENST00000385232 95 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HNF4AP41235 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 RPL23AP59-201ENST00000399415 461 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AL121834.1-202ENST00000404494 277 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 HDGFP1-201ENST00000405943 252 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 ATF1P1-201ENST00000406040 927 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HNF4AP41235 RN7SKP106-201ENST00000410832 272 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 CEACAMP8-201ENST00000413902 580 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.46□□□□□ -1.7
HNF4AP41235 OR2X1P-201ENST00000421144 687 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AC092832.1-201ENST00000422934 400 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 RPL7P4-203ENST00000430239 730 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 FABP5P3-201ENST00000437960 408 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 UBE2V1P5-201ENST00000440070 405 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 RNF2P1-201ENST00000442955 1010 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AC233982.1-201ENST00000451247 436 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.46□□□□□ -1.7
HNF4AP41235 AC009963.2-201ENST00000453431 138 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 ISCUP1-201ENST00000454451 448 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 FGF7P3-201ENST00000454645 303 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.46□□□□□ -1.7
HNF4AP41235 AC087385.1-201ENST00000475062 312 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 RPL12P20-201ENST00000475538 479 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AC119751.4-201ENST00000507498 357 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 RNU6-415P-201ENST00000516252 97 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.46□□□□□ -1.7
HNF4AP41235 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.46□□□□□ -1.7
HNF4AP41235 AC113192.3-201ENST00000529152 742 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.46□□□□□ -1.7
HNF4AP41235 CYCSP28-201ENST00000534284 321 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HNF4AP41235 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.46□□□□□ -1.7
HNF4AP41235 AC105129.1-201ENST00000560250 297 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 ATP5J2P6-201ENST00000565203 266 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AC106734.1-201ENST00000568646 663 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.46□□□□□ -1.7
HNF4AP41235 AC091178.1-203ENST00000584586 279 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HNF4AP41235 RMST_10.1-201ENST00000616309 154 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.46□□□□□ -1.7
HNF4AP41235 AC009269.6-201ENST00000621778 588 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AL049777.1-201ENST00000622740 518 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AC006065.5-201ENST00000623427 349 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AC010872.1-201ENST00000624225 675 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 AC055839.1-201ENST00000634467 498 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HNF4AP41235 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.46□□□□□ -1.7
HNF4AP41235 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HNF4AP41235 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HNF4AP41235 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HNF4AP41235 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HNF4AP41235 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HNF4AP41235 EOGT-210ENST00000615922 1931 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 HSPD1P14-201ENST00000432666 1618 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 MTND4P9-201ENST00000507819 1346 ntBASIC4.46□□□□□ -1.7
HNF4AP41235 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HNF4AP41235 AC011978.2-201ENST00000569835 2054 ntBASIC4.45□□□□□ -1.7
HNF4AP41235 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.45□□□□□ -1.7
HNF4AP41235 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HNF4AP41235 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HNF4AP41235 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HNF4AP41235 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HNF4AP41235 AC103591.2-201ENST00000265259 766 ntBASIC4.45□□□□□ -1.7
HNF4AP41235 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HNF4AP41235 SNORA63.3-201ENST00000362682 132 ntBASIC4.45□□□□□ -1.7
HNF4AP41235 RNU6-792P-201ENST00000363490 107 ntBASIC4.45□□□□□ -1.7
HNF4AP41235 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HNF4AP41235 MIR298-201ENST00000401212 88 ntBASIC4.45□□□□□ -1.7
HNF4AP41235 AL133270.1-201ENST00000402635 279 ntBASIC4.45□□□□□ -1.7
HNF4AP41235 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.45□□□□□ -1.7
HNF4AP41235 AC009263.1-201ENST00000441193 1239 ntBASIC4.45□□□□□ -1.7
HNF4AP41235 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.45□□□□□ -1.7
HNF4AP41235 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.45□□□□□ -1.7
HNF4AP41235 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms