Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.14□□□□□ -1.75
SOX3P41225 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX3P41225 CYB5AP5-201ENST00000549779 389 ntBASIC4.14□□□□□ -1.75
SOX3P41225 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX3P41225 AC027104.1-201ENST00000563702 681 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX3P41225 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX3P41225 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX3P41225 ZNF92P3-201ENST00000596594 954 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AL606834.3-201ENST00000602615 496 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AC090948.1-201ENST00000607464 549 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AL121652.1-201ENST00000608851 448 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AC096586.1-201ENST00000610267 561 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AC015813.4-201ENST00000610469 179 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AL035461.2-201ENST00000619201 524 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX3P41225 MIR6810-201ENST00000622701 70 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AC006065.6-201ENST00000625201 545 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AC010300.1-201ENST00000600671 5134 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AC016588.2-201ENST00000632484 3021 ntBASIC4.14□□□□□ -1.75
SOX3P41225 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
SOX3P41225 AC006971.1-201ENST00000407916 4486 ntBASIC4.14□□□□□ -1.75
SOX3P41225 AC093775.1-201ENST00000624154 1868 ntBASIC4.13□□□□□ -1.75
SOX3P41225 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SOX3P41225 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX3P41225 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX3P41225 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
SOX3P41225 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX3P41225 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
SOX3P41225 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX3P41225 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.13□□□□□ -1.75
SOX3P41225 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX3P41225 RPL32P3-201ENST00000359025 275 ntBASIC4.13□□□□□ -1.75
SOX3P41225 RNU6-543P-201ENST00000362576 108 ntBASIC4.13□□□□□ -1.75
SOX3P41225 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
SOX3P41225 RNU6-932P-201ENST00000391108 106 ntBASIC4.13□□□□□ -1.75
SOX3P41225 HMGB3P18-201ENST00000406327 590 ntBASIC4.13□□□□□ -1.75
SOX3P41225 FCF1P5-201ENST00000406490 482 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX3P41225 P2RY10P2-201ENST00000416730 913 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX3P41225 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX3P41225 AL592293.2-201ENST00000422292 996 ntBASIC4.13□□□□□ -1.75
SOX3P41225 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.13□□□□□ -1.75
SOX3P41225 SKP1P3-201ENST00000429280 487 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX3P41225 AC073143.1-201ENST00000436316 395 ntBASIC4.13□□□□□ -1.75
SOX3P41225 MED6P1-201ENST00000439659 713 ntBASIC4.13□□□□□ -1.75
SOX3P41225 ARL5AP2-201ENST00000444698 533 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC012671.1-201ENST00000451912 203 ntBASIC4.13□□□□□ -1.75
SOX3P41225 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX3P41225 AC008280.2-201ENST00000455473 307 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX3P41225 AC011276.1-201ENST00000469688 323 ntBASIC4.13□□□□□ -1.75
SOX3P41225 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX3P41225 NIP7P2-201ENST00000485801 544 ntBASIC4.13□□□□□ -1.75
SOX3P41225 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.13□□□□□ -1.75
SOX3P41225 RPS27AP16-201ENST00000492222 470 ntBASIC4.13□□□□□ -1.75
SOX3P41225 TRAV31-201ENST00000502780 342 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC025674.1-201ENST00000507074 324 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC093840.1-201ENST00000511599 336 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.13□□□□□ -1.75
SOX3P41225 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX3P41225 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX3P41225 OR8G5-201ENST00000524943 1041 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AP002812.4-201ENST00000532139 286 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC011611.5-201ENST00000552477 578 ntBASIC4.13□□□□□ -1.75
SOX3P41225 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX3P41225 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX3P41225 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SOX3P41225 MIR4789-201ENST00000577469 82 ntBASIC4.13□□□□□ -1.75
SOX3P41225 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX3P41225 MIR4760-201ENST00000585040 80 ntBASIC4.13□□□□□ -1.75
SOX3P41225 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX3P41225 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX3P41225 AP001160.4-201ENST00000596971 382 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX3P41225 AP002906.1-201ENST00000603405 233 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC017076.1-201ENST00000607613 578 ntBASIC4.13□□□□□ -1.75
SOX3P41225 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.13□□□□□ -1.75
SOX3P41225 MIR7973-1-201ENST00000614683 76 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC084824.4-201ENST00000620106 731 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC091046.2-201ENST00000620775 665 ntBASIC4.13□□□□□ -1.75
SOX3P41225 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SOX3P41225 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.13□□□□□ -1.75
SOX3P41225 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SOX3P41225 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SOX3P41225 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX3P41225 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX3P41225 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX3P41225 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SOX3P41225 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.13□□□□□ -1.75
SOX3P41225 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX3P41225 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX3P41225 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.13□□□□□ -1.75
SOX3P41225 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.12□□□□□ -1.75
SOX3P41225 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
SOX3P41225 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.12□□□□□ -1.75
SOX3P41225 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.12□□□□□ -1.75
SOX3P41225 RNU5B-1-201ENST00000363286 116 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms